Telopea speciosissima (New South Wales waratah): 122649032
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Entry
122649032 CDS
T07910
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122649032
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122649032
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
U-box type E3
122649032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122649032
NCBI-ProteinID:
XP_043698313
LinkDB
All DBs
Position
1:35573633..35588472
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AA seq
907 aa
AA seq
DB search
MAVYYKFKSAKDYDSISIDGHFISVANLKEKIFESKHLGRGTDFDLMVSNAQTNEEYCDE
DTLIPKNTSVLIRRVPGRPRMPIVAEQDESKVLENKVEDAQPAKSSYPVPDSSVTRFPEE
SEWDEFGNDLYAIPEVLPVQSSNPVQDAPPPSKADEDSKIRALIDTPALDWQRQPQDGFG
SGRGFGRGMGGRMMGGRGFGRAGGLERGLERKTPPVGYICHRCKVPGHFIQHCPTNGDPN
YDIKRVKPPTGIPKSMLMTTPDGSYALPSGAVAVLKPNEAAFEKEIEGLPSTRSVSELPP
ELRCPLCKEVMKDAVLTSKCCFKSFCDKCIRDHIISKSICVCGATNILADDLLPNKTLRD
TINRILESNNSSAENAGSMLQIQDMESARSAQPKVPSPTFSATSKGEHVQPPSKDVTPDL
KDTTNEKKPTMSAPQPSVEKVRIAKPMDFSEATRESASVKEATSQCSAPLPEEEVQQKLQ
AGELGKKKKKKKARLPLNAADMQWRSSQDIAPENYMMPLGPSAYNPYWAGMQLGMDGYAA
PYSGAIPYMGYAPGPFDVPFGGIVPQDPFVGNQGFGGQGFMLPVVPPQRDLSELAMGTYP
VPPVMSREEFEARKADLRRKREIDRQRESRERSKELDGGREVSSSGGVSSMKSKPRPVSH
VGSADYAHHQRIESERASSRERFSRESESTRHGKKRAEHPPRHDDDYHDHHHRHEQQHHH
RHHKDDDDTRTASAVEAAPKVGGAAAAAAAAAERKLKGSVFSRISFPEEGGTKKRKVSSS
TEESKEVVANGYNDLEPSPSSHNRPSSNGYRDEWKPPVKGTAAVSSSAGSTGAGVVGRRK
SMVDHDSSDDERHFKRRPSRYEPPPPPPDEWEEEARPSRSSRERERERDRDRGRDHERER
GYSSKHR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatactataagtttaaaagtgcaaaagattacgactctatttctattgacggt
catttcatatcagttgcgaatttgaaagaaaaaatatttgaatccaagcacttgggcagg
ggtactgactttgacctcatggtctccaacgcccagactaatgaagagtattgtgatgaa
gacacgctgataccaaaaaatacttctgttttaattcgtcgagttcctggacgtcctcga
atgcccattgttgctgaacaagacgagtctaaagtattagagaataaggtagaggatgct
caacctgcaaagagcagctacccagtaccagattcttctgtcacaagatttcctgaggag
tcagaatgggatgaatttggtaatgatttgtatgccattccggaagtgttgccagttcag
tctagtaatccagtccaggatgctcctcctccaagtaaagctgatgaggatagcaagatt
agggctttaattgatactcctgccttggattggcagcggcaacctcaagatggcttcggc
tctggcagaggttttggaaggggtatgggaggaagaatgatgggaggccggggttttggt
cgggcgggtgggttggagcgagggttggagcgaaagacacctccagtaggttatatctgc
cacagatgcaaagtgcctgggcatttcattcagcattgtcctacgaatggtgacccaaat
tatgacatcaaaagggtgaaacctccgaccggtattccaaaatcaatgttgatgaccacc
ccagatggctcatatgccttgccaagtggtgctgttgctgttttaaaaccaaatgaagct
gcttttgagaaggaaattgaaggtttaccttccactcggtcagtgagtgaacttccacct
gaacttcgctgtccattgtgtaaggaagtaatgaaagatgctgttctgacaagcaagtgt
tgtttcaagagtttttgcgacaaatgtatcagggaccatattatctcgaagtcaatttgt
gtttgtggggcgacaaatatacttgcagatgatcttctgcctaataagacactaagggat
accatcaatcgcattcttgagtcgaataacagcagtgcagaaaatgcagggagcatgtta
caaatacaagatatggaatctgcacgctctgcgcaacccaaagtaccatcgccaactttt
tctgctacttcaaagggagagcatgtacaaccgccatcgaaagatgtcactccagatttg
aaggataccacgaatgaaaaaaaacccaccatgagtgctccacagccatctgtggagaaa
gttagaattgcaaaacccatggatttttctgaagctacacgtgagtctgcaagtgtgaag
gaagcaacatcacaatgcagtgcaccacttcccgaggaagaagtgcagcagaagctgcaa
gctggtgagctaggtaaaaaaaagaagaagaagaaagcccgtttgcctttaaatgctgca
gatatgcagtggagaagctctcaggacattgcacctgaaaactatatgatgcctctcggt
ccttcagcttataacccatactgggctggcatgcagctcgggatggatggatatgccgct
ccttattctggtgctataccctatatgggttatgctcctggcccctttgatgtacccttt
ggaggaattgtacctcaagatccttttgttggaaaccaaggatttggaggtcaaggattt
atgttacctgttgtaccaccccagagggatctctcagagttggctatgggcacatatcct
gtaccaccagtcatgagcagagaggaatttgaggctcggaaggctgacctgagaagaaaa
cgggaaattgaccgacaacgtgaaagcagggaacgttcaaaggaactagacggtggtagg
gaagttagcagcagtggtggtgtttcttcaatgaaatcgaaacctaggcctgtgtcgcat
gtggggagcgcagattacgcccaccatcaacgaattgagagtgaaagggcctcgagtcgg
gagcggttctcacgtgaatccgagtcaactcggcacgggaagaagagagcggagcacccg
ccccgccacgacgatgattaccatgaccaccatcaccgccatgagcagcagcaccatcac
cgccaccacaaggacgatgatgacactcgaacggcatcagccgtggaggcagcacccaag
gttggaggagcagcagcagcagcagcagctgcagcagagcggaagctgaaggggagcgtg
ttttcccgtattagctttcccgaggaaggaggcactaagaagaggaaggtgtcgtcttct
acggaggagagtaaggaagttgttgcaaacgggtataatgacttggaaccctctccatcg
tctcataacaggccatcgtctaatgggtaccgtgacgagtggaagccaccggtgaagggt
acagcggcggtgtcatcgagtgctgggagtaccggagctggagtggttggacgacggaag
agcatggtcgatcacgactccagcgatgacgagcggcatttcaaaaggagaccttcccgg
tatgaaccaccaccgccgcctcctgacgaatgggaagaggaagcccggccttctcgaagc
tcgagggagcgagaacgagaacgagatcgagatcgcgggagagaccatgaacgcgaacga
gggtacagtagcaaacacaggtag
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