Telopea speciosissima (New South Wales waratah): 122649082
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Entry
122649082 CDS
T07910
Name
(RefSeq) uncharacterized protein LOC122649082
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122649082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122649082
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122649082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
122649082
NCBI-ProteinID:
XP_043698381
LinkDB
All DBs
Position
1:12127930..12136349
Genome browser
AA seq
1396 aa
AA seq
DB search
MAIVRNNFRVSKLVGEFSPGSRDSVSTDEDELHKRSSTSESDNDEDDDDDDVDSGAGSDD
FDMSELGEAGAESCQVGSSNCSIPYELYDLPELGEVLTLDAWNNCLSEEERFALAEYLPD
MDQETFMLTLKELFSGNNFHFGSPVAKLFDMLKEGLCEPRVTLYRQGLNFFQKREHYHVL
RKYQNSMVSSLTQIRDAWENYAGYSIEERLRILNIMRSQRSLMYEKMEDMGLETDTSDRD
ESGEGFWGKRLKDFKLRPKMGRHDIYSASPTLNNCSRGRSITLETAKHGKSNPKGILKFA
GVKALSVKELAGHLPSPIQHGLDSKSRAYLPTLALPRQDRVAGYDSEYAPRSRGQIRGEE
DAERPPYEVDLLRDRTLGGAMSKAGSFKPGKKSKFFKSEDEFAAESLMGLPLAIQNDLHS
QGRSRNVIQMAELEPLKVKPNSERSSYDYYSQAAGKKAKYSEKLQQSATQDQMKATKDQA
QHLLLKGNRSDWSTGRQPFQRNKVQEEAFDVDYPVKHDERSVKSKKWKMGKEFQSGKTNV
DLDTKVKSHRTFPTQMNDTLFSSDYRAKASVDKVKKKSALNGGRNMEERRGTSMFARSEE
TESDSSEQVSEEEINPFRNKLGHARGVTGHQSTKKQVADPKRGSKLGRKDREYAEALEQL
RMADVNVYSSKGKQKGKIRDPSSLRTYATGISEESGFIGFAKTDDDRKKTSKLGKNGHVK
GEPGERLHLPSLKAYPAERKQKGKVDHDYFSPRSNYMHDYVDEEDNDLHLKHRLVDDHGL
TNRLGRKGQNSDAHLTNHHERLKIPLLGSNSKKRKGKADVKYMDGADESEQMQSSPQHQV
DDPTSLKKRGKRKMEAEIDSLAVENSEPLVSERGATDVEAAARPPQKPFTLITPTVHTGF
SFSIIHLLSAVRMAMITPNAEDSSDLGNHLSWSDGRQKSNNEEQRRKPERTNVDMNNSEL
VGQKTLPSLTVQEIVNRVRSNPGDPCILETQEPLQDLIRGVLKIFSSKTAPLGAKGWKPL
VCYEKSTKSWSWIGPLTDSSSDLEAVEEETSSEAWSLPHKMLVKLVDSFANWLKSGQETL
QQIGSLPAPPVTLMQPNLDEKERFRDLRAQKSLTTISPSSEEVRAYFRKEELLRYSVPDR
AFSYTASDGKKSIVAPLRRCGGKPTSKARDHFMLKPDRPPHVTILCLVRDAAARLPGSIG
TRADVCTLIRDSQYIVENVSDAQINQVVSGALDRLHYERDPCVQFDGDRKLWVYLHRERE
EEDFEDDGTSSTKKWKRQRKDAIEQSDPEALNMPYHGSREPTAGGPTAGYDLGSDLNVEP
SPTHEGLREELEYNNSKRNVEDNVDSYVSSAQGSLHPGWEAQENKVLCQENSTNEDFDDE
TFSRERPVGLLSASLL
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgtaaggaataactttagggtttcgaagttggttggggagttttctccgggg
agtagagacagtgtatcgactgatgaggatgagcttcacaagcgaagctctacgtcagag
tctgataatgatgaagatgacgacgatgacgatgtggactctggggcgggttctgatgac
ttcgacatgtcggaattgggggaagctggggcggaatcttgtcaagttggtagtagtaac
tgtagtattccatacgagctctatgatcttccggaattgggggaagttttgacattggac
gcatggaacaattgcttgagtgaggaggagcgttttgcccttgcggagtaccttcctgat
atggaccaggagacctttatgcttaccttgaaagagctgttctctggcaacaacttccat
tttggaagcccagtggccaagctctttgatatgttgaaggagggattatgtgaaccaaga
gtaacactttatagacagggtttgaatttcttccagaagcgggaacactaccacgttctg
cgcaagtatcagaactctatggtcagtagccttactcagataagggatgcctgggagaac
tatgcaggatacagcattgaagagaggcttcggattctgaacataatgagaagtcagaga
agtctgatgtatgaaaagatggaagatatggggttggagactgacacttcagacagggat
gaatctggtgagggtttctggggcaagagactgaaggatttcaaactcaggcctaagatg
ggccgccatgatatatattcagcgagtccgaccttgaataattgttctcgaggaaggtct
ataaccctggaaactgcaaaacatggcaagtctaatccaaaaggaattttgaagtttgct
ggggtgaaggccctttctgtgaaggagttggcggggcacttaccttcacctattcagcat
ggcctggatagtaaatctagggcttatcttccgacgttagctcttccacggcaagatcgg
gtggcagggtatgattcagaatatgctccacggtcaaggggacagataagaggtgaggaa
gatgcagaacgacctccatatgaagtggatctcctgagagaccgaacccttggaggagca
atgtctaaagctggctcgtttaaaccaggaaagaaatctaaattcttcaaaagtgaagat
gagtttgctgctgaaagtttgatggggctaccgctggcaatacagaatgatttacattct
cagggtaggagcaggaatgtgattcagatggcagaactggaaccattgaaagttaaacca
aatagtgaaagatcttcatatgattattattctcaagctgcagggaaaaaggctaagtat
tctgagaagcttcagcaatctgccacccaagatcagatgaaggccacaaaggaccaagca
cagcatctgttactaaaaggaaatcgatctgactggtctactggaaggcaaccctttcag
cgcaataaagtgcaggaagaagcctttgatgtggactatccggttaagcatgatgaacgg
agtgttaaaagcaaaaagtggaagatggggaaggagtttcaaagtggtaaaactaatgtg
gatcttgatactaaagtcaaatctcatagaacctttccaacccagatgaatgatacattg
ttctcttctgattatagagcaaaggcatcagtagacaaggtgaaaaaaaaatctgcacta
aatggaggacgtaacatggaagagcgtagaggcaccagtatgtttgcccgaagtgaggaa
acagagtcagactcatcggagcaggtcagtgaagaagaaatcaacccttttagaaataag
ctagggcatgccaggggtgtgacgggtcatcagtctacaaagaaacaggtggcagatcct
aaaaggggcagtaaacttgggaggaaagatagggagtatgctgaggcacttgaacagtta
cgtatggcggatgtaaacgtttactcatcaaaaggtaaacagaagggaaagattcgagat
ccaagttccctgcgcacctacgctactggaatttctgaggagagtgggttcattggtttt
gctaagactgatgatgacaggaaaaaaacttccaaactggggaagaatggccatgtgaag
ggtgaacctggtgaaaggttacacctgccatcgttaaaggcctatcctgctgagagaaag
caaaaaggaaaagttgaccatgattatttttcgccgcgttcaaattacatgcatgattac
gttgatgaggaggacaatgacttgcatctaaaacacaggttggttgatgaccatggactg
accaataggttagggaggaaaggtcaaaattctgatgctcacttaactaatcatcatgaa
agattaaaaattcccttgttaggcagcaactccaagaagcggaaaggcaaggctgatgta
aaatacatggatggggcagatgaatctgaacaaatgcagtctagtcctcagcatcaagtt
gatgatccaacatccttgaagaaacgtggaaaacggaaaatggaggctgaaatagattct
ttggctgttgaaaattccgagccacttgtttcagaaagaggggctacagatgtagaggca
gctgcaagaccacctcagaagccatttactttgatcacaccaactgttcatactggcttc
tctttctcaattatacatcttctttcagcagttcgcatggcaatgattactcctaatgcc
gaagatagctcagatctcggcaaccatcttagctggagtgatggaaggcaaaaatctaac
aatgaagagcagaggagaaagcctgaaagaactaacgtggatatgaataattcagaactt
gtgggtcagaagactttgccctctctcactgttcaagagattgtcaaccgtgtgagatca
aaccctggagatccttgtattcttgaaacgcaggagccactgcaggatttgatcagagga
gtattgaagatattttcatccaaaacagcccctttgggagcgaagggttggaagccgctt
gtctgctatgaaaaatctacaaaaagttggtcttggattggaccacttactgatagctca
tcagatcttgaggctgttgaagaagaaacctcttctgaggcttggagtcttcctcacaag
atgcttgtgaagttggttgattcatttgctaactggctgaaaagtggtcaagaaactctt
cagcaaataggaagccttcctgctccccctgtgacattaatgcagccgaacctggatgag
aaggaaaggtttagggacctaagagctcagaagagtctcaccaccatcagcccaagctct
gaagaagtaagggcttactttcggaaggaggaacttcttaggtactctgttcctgacagg
gccttttcatacactgcttctgatggtaaaaaatccattgttgctcctctgagaaggtgt
ggtggtaagccaacttccaaagcccgagaccattttatgcttaaacctgatcggccacct
catgttacgattctctgtcttgtgagggatgcagctgctcgattgcctggaagcattggc
acccgagcagatgtttgtacactgataagagattcacagtacattgtggaaaatgtctct
gatgcacaaataaaccaagttgttagtggagcgctggatcgtctgcactatgaacgagat
ccttgtgtgcaatttgatggagataggaagttatgggtttatttacatagggaaagagaa
gaagaagatttcgaagatgatgggacctcatctacaaagaaatggaaaagacaaagaaaa
gatgctatagagcaatcagaccctgaggcactgaacatgccttatcatgggtctagggag
ccaactgcaggtggtccaactgctggatatgatttgggctctgatctcaatgttgagcca
tcgcctactcatgaagggttaagagaagagcttgaatacaacaattccaagagaaatgtg
gaggataatgttgattcctatgttagttctgcacaaggtagcttgcatccgggttgggaa
gctcaggaaaacaaggtgctctgtcaagaaaattccacaaatgaagattttgatgatgaa
acatttagcagagaaagaccagttgggctcttgagtgcaagcttattgtga
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