Telopea speciosissima (New South Wales waratah): 122649834
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Entry
122649834 CDS
T07910
Name
(RefSeq) ATP-dependent DNA helicase RecQ-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122649834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122649834
03400 DNA repair and recombination proteins [BR:
tss03400
]
122649834
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122649834
Messenger RNA biogenesis [BR:
tss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
122649834
DNA repair and recombination proteins [BR:
tss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
122649834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122649834
NCBI-ProteinID:
XP_043699015
LinkDB
All DBs
Position
2:complement(82901207..82966761)
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AA seq
915 aa
AA seq
DB search
MESVLKKYFGYSLFRPNQKEIIEEILRGRDSLVVMATGSGKSLCYQIPSLILRKTAVVVS
PLLALMQDQVMSLKQRGIKAEYMGSSQTDSSVYGNAESGQFDIVYMTPERACSLPSRFWS
NLSNVGICLLAIDEAHCISEWGHDFRKEYRQLGKLRGILLDVPVVALTATATEKVQLDII
NSLDMKDPFIAIGSFDRPNLFYGVKCCGRGLLLVDELVGEISKHVASSDSTIVYCTTVKD
AEQIFMSLNKAGIKAGIYHGQMANKAREQSHRSFIRDELLVMVATVAFGMGVDKSNIRCV
IHYGCPKSVENYYQESGRCGRDGLASICWLYYSRSDFTKVDFYCGEAQTANHKQAIMDSL
RAAEHYCSSVTCRRKFLLDYFGESVAANNCGSCDNCTNSKMERDMSREAYFLLSSVRSCG
GRWGLNMPINILRGSRSKKVRDFQFEKLPLHGLGKDHSSNWWKALADQLIAHGYLTETFS
DIYKYVSVSEKGVQFLKTATPDRQQPLVLAVTSEMVEGEEHMSGSDKPAWDLQNLSGPEW
KGFSEAEAKLFRMLLDMRMKLARRSGTAPYAICSDQTIQNIASTRPSSKARLANIDGVNQ
HFLTIYGDYILENIRHLSQGLDLSLDGKASVQATIREKVYPVPNCQRKLTPAKFEAWKMW
NENDLCFQEIANAPGRPAPIKEQTIIGYLLDAAQEGFEINWTRFCVEIGLTQMLYLEIQD
AISKVGSREKLNPIKNELPEHVSYVLIKACLTIQDLGISKDVIPSDLQSSKSCEVHPRTS
ESLQNLNCENHPEGPHLSEASIYDMGANSTLNGNALCPHTVSSPKILAGIKQPRLDDVQI
PTWKFQKTDVPEEGSKIAVEATKGSVLEWLTNHDGVALSDITKHFNESEESVMDLLRCLE
SEFLVFKKNNLYRIM
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtactcaagaaatatttcgggtattctttattccggccaaatcagaaggag
ataattgaagaaatcttgcgggggagagactccttagtggtaatggccactggaagcggg
aaatcattgtgctaccagattccctcattgatattaagaaaaactgcagttgttgtgagc
cctcttctagctttaatgcaagaccaggtaatgagtttaaaacaacggggcatcaaagct
gaatatatggggagcagccagaccgattcatccgtttacggaaatgctgagagtgggcag
tttgatattgtgtacatgactccagagagggcatgctcgcttccttctaggttttggtca
aacttgtcgaatgtgggaatttgtttgctggcgattgatgaagcgcattgcatatcagag
tggggccatgatttcaggaaggagtacaggcagttgggcaaattacgtggtattctcttg
gatgttcctgttgttgccttaactgcgactgctacggagaaggttcaactagacattatt
aattctttggatatgaaagatccttttattgctattggttcatttgatcggccaaatctt
ttctatggggtcaagtgttgtggtcgtggtcttctgcttgtggacgagcttgtgggtgaa
atctcaaaacatgtcgcttcatctgactcaactattgtatattgtacaaccgtcaaagat
gctgaacagattttcatgtcacttaacaaggctggaatcaaggctggcatttatcatggt
caaatggccaataaagctcgtgagcagtctcacagatcattcataagagatgaactgctt
gtcatggttgcaactgttgcttttggaatgggtgtagataagtcaaacataaggtgtgta
atacactacggttgcccaaaaagtgttgagaattattaccaagaaagtgggaggtgtggt
agagatggcttagcttctatctgttggctttattactcaaggagtgacttcacaaaagtc
gacttctactgtggagaagcacaaacagcaaatcataaacaagctatcatggattcttta
agagcagctgagcattattgctcatcggttacttgtcgtagaaagtttttgctggactac
ttcggggaaagtgtagcagccaataattgtggaagttgtgataactgcaccaactcaaag
atggagcgtgacatgtctagggaagcatattttctgttgtcttctgtccgatcttgtggg
ggtcgttggggccttaatatgcctataaatattcttcgcggatcacgttccaagaaagtt
cgggattttcagtttgaaaagcttccacttcatgggctagggaaagatcattcgtctaat
tggtggaaagcacttgctgatcagttgattgctcatggttatttgacagaaacttttagt
gatatatataaatatgtgagtgtcagcgaaaaaggtgtgcagtttcttaaaactgctacc
cctgatcggcaacaaccactagttttggcagtgacttccgaaatggttgagggagaggaa
catatgagtggatctgacaaacctgcatgggacctccaaaatttgtctggtccagaatgg
aaaggattttctgaggctgaggcaaagctcttccgcatgcttttagacatgagaatgaag
cttgctagacgctccggaacagctccatacgctatttgcagtgatcaaacaattcaaaat
attgcaagcacaaggccatctagtaaagctaggctagcaaacatagatggtgtcaaccag
cactttttgacaatttatggggattatattctcgaaaatatccgtcatttgtcacaaggg
ctggacctctctttggatgggaaggcaagcgtacaagccactatcagagaaaaggtgtat
cctgtcccaaactgccagagaaaattaacaccagcaaaatttgaagcttggaaaatgtgg
aatgaaaatgatctctgttttcaggagatagctaatgctcctggaagaccggctccaata
aaagaacaaacaattataggttatcttcttgacgctgctcaggaaggattcgaaatcaat
tggaccagattctgtgtggaaatagggctgactcaaatgctatacttagaaattcaggat
gctatatcaaaagttgggtcaagagaaaagttgaatcctataaaaaatgaattaccagag
catgtaagttatgttctcatcaaggcatgtctgacaatacaagatcttgggatatcaaaa
gacgtaattccgtctgaccttcaatcctcaaaatcatgtgaagtacaccctaggacatca
gaatcgttgcaaaacctcaactgcgaaaaccatccagaaggccctcatttgtccgaagca
tcaatttacgatatgggagctaattctaccttaaatggaaacgctctctgcccccacaca
gtaagcagccctaagatacttgctggcataaagcaaccacgactcgatgatgttcaaatt
cctacgtggaagttccagaaaactgatgtaccggaagaaggaagcaaaatagcagtggaa
gcaacaaaaggcagtgtcttggagtggcttacgaaccatgatggggttgctctttctgat
attacaaagcatttcaatgaatccgaggagtctgtgatggatctgttgagatgccttgag
agtgagtttttagtttttaaaaagaacaatttgtacagaattatgtaa
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