Telopea speciosissima (New South Wales waratah): 122649859
Help
Entry
122649859 CDS
T07910
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122649859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122649859
Spliceosome [BR:
tss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122649859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
122649859
NCBI-ProteinID:
XP_043699044
LinkDB
All DBs
Position
2:6404997..6416456
Genome browser
AA seq
683 aa
AA seq
DB search
MEEGMMDVEEEIEPVLVTNFENKEGVGERVDNAQSTVSSNGSGSIAIGAALEPLSMASKV
LPETSAPSQSPPIKVSSISTTNENKGVSVTRSHEVPGKSSTDGTTSAAGKSGSLSLDALV
KAKKALQMQKELAEKLKKIPLLNKGASSDGSLQLGSTDKEEPKTQLPSTARQQATASVKP
PTTGMTALPGLTTIPNYEAVKRAQELAAKMGFHQDPEFAPLINMFPGNATTDIAVQQKPS
KAPVLRLDALGREIDEHGNVINMPKLTNLSTLKVNINKQKKEAFQILKPELDVDPDLNPH
FDPGMGINKTKLLRPKRMSFQFVEEGKWAKQAEIIRFKSQFGEAQAKELKTKQAQLAKAK
AEPDINPNLIEVSERVVKKEKPKDPTPETEWWDIPILLSGTYGDLNEGSNITGDELKMDK
ITIYIEHPLPIEPPADPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPK
PKVKMSNLMKVLGSEATQDPTRLEMEIRSAAAEREQAHVDRNIARKLTPAEHRGKKERKL
FEDPNTLETLVSVYRINDLSHPQTHFKVDVNAQENRLTGCAVISDGISVVVVEGGSKPIK
RYGKLMLKRINWAASVGIDEDGEDESEDKPVNKCDLVWQGSVAKPSFNRFLVHQCRTEAA
ARKVFSDAGVGHYWDLALNYTDD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggtatgatggatgtggaggaagagatagaaccagttttggttacaaacttc
gagaacaaggaaggtgtaggtgagcgggtggataatgctcagagcactgtcagttcaaat
ggaagtggttccatagctattggtgctgctctggaaccacttagtatggcatcgaaggta
ctgcctgagacttctgcacccagtcaatcccctcctatcaaggtatcttcaatttccacc
accaatgaaaataagggagttagtgttaccagatctcatgaggttcctggaaaatccagt
acagatgggacaacttcagctgctggcaagagtggaagtctgtctcttgatgctttagtg
aaagctaagaaagctttacagatgcaaaaagaattggcagaaaagctgaaaaagattcca
ttgttgaataaaggagcaagctcagatggtagcctacagcttggatcaacagacaaggag
gaacctaaaactcagctaccaagcacagcaaggcagcaagctacggcttctgtgaagccc
cccaccactggcatgactgcccttcctgggcttacaaccatacctaactatgaagctgta
aaacgagcacaagaacttgctgcaaagatgggatttcaccaggacccagaatttgctcct
ctcataaacatgtttccagggaacgcaacaacagacattgctgtccagcagaagccatcc
aaagcccctgttctccgtttggatgcacttggtagagaaatagatgagcatggaaatgta
atcaatatgccgaaactgacaaatctcagcacattaaaggtcaacatcaacaaacagaaa
aaggaagctttccagattcttaaacctgagctggatgttgatccagatttgaatcctcat
ttcgaccctggaatgggaatcaataaaaccaagctgttgagacccaagaggatgtctttc
cagtttgtagaggaaggcaaatgggcaaagcaggcagaaataattagattcaagagtcaa
tttggagaagcacaagctaaagagttgaagacaaaacaagcacagctggcaaaggcaaag
gcagagcctgatatcaatccgaatttgatagaggtatcggagagagttgtcaagaaggaa
aaaccgaaggacccaactccggaaactgagtggtgggatataccaattttgctttctgga
acctatggcgacttaaatgaaggtagtaacatcactggagatgaacttaaaatggataag
attacaatttacatcgagcatcctcttcctattgagccccctgcagatcctgctccacca
cctccacaacctctgaagcttaccaagaaggagcagaagaaattgcgcacacaacggcgc
ttagcgaaggaaaaagataggcaggaaatgataaggcaaggtctgttagaacccccaaag
cccaaggtgaagatgagcaatctcatgaaagtccttggttcagaagcaacacaagatccc
accaggcttgaaatggaaatacggagtgcggctgctgagcgtgaacaagcccatgttgac
aggaacattgcacgtaagctcacaccggcagagcaccgtgggaagaaagagaggaagctc
tttgaggatccaaatacgctggagacccttgtgtcagtgtatcggatcaatgacctttca
catccacagacccactttaaggttgacgtcaatgcccaggagaatcgcctgacgggctgt
gctgtcatatcagatggcattagtgtggtggtcgtggaaggtggtagtaagcccatcaag
aggtatgggaagttgatgctcaagcgtattaattgggctgcctcagtgggtattgacgaa
gatggtgaagatgaaagtgaggacaaacctgttaacaagtgtgatttagtgtggcaaggc
agtgttgctaagccgagcttcaacaggtttcttgttcaccagtgcaggactgaagctgcc
gcaaggaaagtgttttctgatgctggggttggtcactattgggatctggcccttaactat
acggatgactaa
DBGET
integrated database retrieval system
