KEGG   Telopea speciosissima (New South Wales waratah): 122649933
Entry
122649933         CDS       T07910                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122649933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122649933
   03041 Spliceosome [BR:tss03041]
    122649933
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122649933
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122649933
Spliceosome [BR:tss03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122649933
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 122649933
NCBI-ProteinID: XP_043699135
LinkDB
Position
2:67355076..67358848
AA seq 435 aa
MDPATKKRKADENGDAALGSKLTSEDTRKIIEPFTQEQFLDILQDAAACHLDVLDAIRAI
ADRDPAQRKLFIRGLGWDTTTEGLRTLFSQYGDLEEAVVILDKATGKSKGYGFVTFKHID
GAMLALKEPSKKIDGRMTVTQLAAPGTSGPTANQPPAVDVSMRKIYVGNVPPDMPADRLL
AHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAKASLVDATKNIDGHQLLCKLAIE
GKKAKPGQPGVAVAGVQPPTGVPGEIAGDGLGLPPPSSMPSTLSSHYGGHPSGLSAYGGF
SGAHQGQPPLGGHHHHNLNSPLQSSIGAPGLSVGTQVPSSLGATGGYGAGLSGGPYGASQ
YGGPTSGGYGGLGGSGSSLYRLPPTSVGMPSGNYPDSGHYGLTSAYPSQHNLPTGTSPVP
RVPPGGLYQSMPPYY
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggatcctgctaccaagaagaggaaggccgacgagaatggcgacgctgctttaggttcg
aagttaacatcagaggacactcgcaagattatcgaacccttcactcaagagcaatttctc
gatatcctacaagatgccgccgcctgtcacttagacgttctcgatgccatccgtgccatt
gccgatcgcgatccagcgcagcgcaagctgttcatccgcggtctcggttgggacacaacc
accgaaggcctgcgcactctgttctcacaatacggtgatcttgaagaagccgtggtcatc
ctcgacaaggctacagggaagagcaaaggttatggctttgtcactttcaagcacatcgac
ggtgctatgctcgccttgaaggagcccagtaagaagatcgacggtcggatgactgtcact
cagctcgccgccccagggacttcgggccccactgcaaatcagccaccggcggttgatgtg
tcaatgcgtaagatttatgttgggaatgttcctccagatatgcctgcggatcgcttgctt
gctcacttctcgtcttatggtgagatagaggagggaccattagggttcgataagcagacc
ggaaagtcaagagggtttgccttattcgtctacaaaactgctgaggccgcaaaggcttct
cttgttgatgccaccaagaacattgatgggcatcagttgctctgcaaattggcgattgaa
ggaaagaaggcgaagcctggccaacctggagtagctgttgcaggagttcaaccccccact
ggtgtccccggagaaattgccggcgatggacttggcttgccaccaccgtcttccatgccg
agcactctttcttctcattacggtggtcatccttctgggttgtctgcctatggcggtttc
tccggtgctcatcagggccaaccaccattgggtggccatcaccaccataatctgaactcg
ccattgcagtcgtctattggtgctcctggcctgtctgttgggactcaggttccatcttcg
ttaggtgccacaggtggctatggtgcaggcttgagtggtggtccatacggcgcttcacag
tatggtggacctacttccggtggttatggtggtttgggtggtagcggatcgtctttatat
cgtttgccgccaacttcggttggaatgccttctgggaattatccagacagtgggcactat
ggtttgacatctgcgtatccaagccagcataacctgcctacagggacatcgccggtgcct
agggtaccacctggtgggttgtatcagagcatgcctccttattactga

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