Telopea speciosissima (New South Wales waratah): 122650096
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Entry
122650096 CDS
T07910
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122650096
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122650096
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122650096
03036 Chromosome and associated proteins [BR:
tss03036
]
122650096
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122650096
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122650096
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122650096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Reo_sigma1
Motif
Other DBs
NCBI-GeneID:
122650096
NCBI-ProteinID:
XP_043699329
LinkDB
All DBs
Position
2:72686656..72691369
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AA seq
503 aa
AA seq
DB search
MFKQFLNRFPRKSPKSDVVDSAGGISGNNVIASGNGIQRTNSGTAVTVRSNSIKRMSSAV
FPASMVAGIEPLLSFKDVPTPERQNLFISKLNLCCVVFDFNDPNKDTVEKDLKRETLIEI
VEFVASGSAKFTEPAIAAICKMCAVNLFRVFPPNYRSNFTGGEADDEEPMFDPAWTHLQI
VYDLLLRFVTSTSLDSKVAKKYINHSFILRLLDLFDSEDPRERDCLKTILHRIYGKFMVH
RPYVRKAVSNIFYRFVFETDRHNGIAELLEIFGSVISGFALPLKEEHKMFLWRALIPLHK
PKSVGVYLQQLSYCLTQFIEKEPKLTITVIKGLLKYWPVTNSQKEVMFLSELEEVLEATN
MAEFQKIMIPLFRRIGSCLNSPHFQVAERALVLWNNDHIIGLIAHNRQVILPLIYPALEK
NIRNHWNQAVLNLTVNVKKMFSEMDDELVVFCQSKYEEEETKQTVAAEKRRVTWEHLETV
ASVQPVTGNTAVLITPTATAITC
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcaattcctcaacagattccctcggaagtcaccgaaatctgatgttgttgat
tctgccggtggcatttccggtaataatgttatcgcctctggtaatgggatccaaagaacg
aacagtgggactgctgtcactgtccgatcaaattctataaagcggatgtcttcggcggtt
ttcccggcgagcatggtggctggaattgaacctcttctttccttcaaagatgttccgact
ccggagaggcagaatctgttcattagtaagttaaacctctgctgtgtggtttttgacttc
aatgacccgaataaggacactgtggagaaagatctgaaacgtgagaccttgatagagatc
gttgagtttgttgcttccgggtcagctaagtttacggagccagcaattgctgcaatatgt
aaaatgtgcgcagtcaacctctttagggtatttcctcctaactaccggtccaattttact
ggtggtgaggcagatgatgaagaacccatgtttgatcctgcttggacacatttacagatt
gtgtatgacttactgcttcgatttgtcacgtctacttctctcgattcgaaggtagcaaag
aagtacattaatcattcgtttattctgagattgcttgatctcttcgattctgaggatcct
agagaacgtgattgtttgaaaacaattctgcataggatatatgggaagtttatggttcac
aggccttacgtacgcaaggctgtaagcaatatcttttatcgttttgtcttcgaaacagac
cgacacaatgggattgctgagctgttggagatttttggcagtgtaattagtgggtttgca
ttaccactaaaggaggaacacaagatgtttttgtggagggctttgattcctctgcataag
ccgaagtctgtgggtgtttaccttcaacagttgtcatactgcctcacacaatttatagag
aaagaacccaagttgacgattactgtaatcaagggattgctaaagtactggccagtaacg
aatagtcagaaggaagtcatgttcttgagtgagttggaagaggttttggaagctaccaac
atggcagaattccagaagatcatgattcctttgttccgccggattggttcttgtcttaac
agcccccatttccaggtagctgaacgagcccttgttttatggaacaatgatcacatcatt
ggtttgattgcgcacaatcggcaggtgatcctgcctctcatctacccagcattagagaag
aacatacggaaccactggaaccaggcggttctcaacctgactgtaaatgtgaagaaaatg
ttctcagagatggatgacgagctggtcgtgttttgccaaagcaagtatgaggaggaagaa
acgaagcaaacagtagcagcagagaagagaagggtgacatgggagcatcttgagacagtt
gccagtgtgcaacctgtgactggaaatacagcagttctcataacacctacagcaactgct
attacatgctaa
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