Telopea speciosissima (New South Wales waratah): 122650301
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Entry
122650301 CDS
T07910
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122650301
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tss01007
]
122650301
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122650301
Enzymes [BR:
tss01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122650301
Amino acid related enzymes [BR:
tss01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122650301
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122650301
Prokaryotic type
122650301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
122650301
NCBI-ProteinID:
XP_043699622
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Position
2:complement(69774629..69850083)
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AA seq
591 aa
AA seq
DB search
MPTVSVGRDRLFAALGMTYTQEEFDELCFDFGIELDDVTTEKAIIRKEKHLEEGATEDEE
VIYKIEVPANRYDLLCLEGLVQSLRIFIGLDQIPNYKLANLPSGSMLKMHVKPETLMIRP
FVVCAVLRGVTFDEARYNSFIDLQDRLHQNICRRRTLVAIGTHDLDTIQGPFTYEALPPQ
DINFVPLKQVKTFRADELMEFYKSDLKLKKFLHIIENSPVFPVIYDCNRNVLSLPPIING
AHSAITLKTKNVFIECTGTDLTKAKIVLNTMVSMFSVYCARKFEVEPVEVVYSDGKSYIS
PDLSVFDLEVPLSYITGTIGVSLEASQVCSLLNKMQLHAEKSLSKEECSIRVSVPPTRSD
VLHACDVMEDVAIAYGYNKIPKRKPASLKSLPLSQISELIRLEIAMNGFTEVLTWILCSY
KENFSMLNRKDDQSIASTIANPRSADFEMSRTSLMPGILKTVAHNKDHPKPIKIFEVGDV
VILDEAKDVGARNRRQLAAMYCGANSGFELIHSLVDRIMEVLGTPFVPIGDDIGYYIRQS
DESEFLPGRQASIIFRGKHIGNFGIVHPEVLTNFDIPDPCSFMELNIESFL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgttagcgttggaagggatcgtctctttgcagccttagggatgacttacact
caagaggagtttgatgaactctgcttcgattttggaatcgagcttgacgacgttacaaca
gagaaggctattatcaggaaagaaaagcatctggaggaaggagctactgaagatgaggaa
gtcatctacaaaatcgaagttcccgcaaacagatatgatttgctttgcctcgaagggctt
gtgcaatccctccgcattttcattgggcttgatcagataccaaattataagctggccaac
cttccaagtggttccatgcttaaaatgcatgtaaaacctgagactttaatgattcgcccc
ttcgttgtctgtgctgttttaagaggagttacttttgatgaagcgagatataacagcttt
attgatcttcaagataggctccatcagaatatttgccggcggaggacattagttgccatt
ggcactcatgatttggatacaatacaaggtcctttcacatacgaggctttgccaccacaa
gatataaactttgtgccactgaaacaggtgaaaactttcagggctgatgagctaatggaa
ttttacaaatcggatctgaaactgaagaaattcttgcacataattgagaactcaccagtg
ttcccagtcatctatgactgcaacagaaatgtgttatccctacctccaattattaatggt
gcacattcagcaattacattgaagaccaagaatgtttttattgaatgtactggcacagat
ttaaccaaggccaagattgtcttgaacacaatggtgtctatgttttctgtgtactgtgca
agaaaatttgaggttgaaccagttgaagtggtatactctgatgggaaatcatatatttct
cctgatctatcagtttttgatttggaggttcctttatcttacatcactggtacaattggc
gtttctctagaggcaagccaggtctgcagtttattgaacaagatgcaattgcatgcggaa
aaatccttatcaaaggaggaatgcagtatccgtgtatcagtacctccaaccagaagtgat
gttcttcatgcttgtgatgtcatggaggatgttgctattgcatatggatacaataaaatt
ccaaagaggaagccagcatctttgaagtctcttcctttgagtcaaattagcgagcttatc
agattggagattgcaatgaatggtttcacggaggtgctaacatggatattgtgctcatac
aaagaaaatttctccatgttgaaccgtaaggatgatcaatcgatagcatcaactattgca
aatcctcgttcagctgattttgagatgtctcgaacaagtctcatgccgggcatattgaaa
actgttgcgcacaacaaagaccatccaaagcccataaagatatttgaagtgggtgatgtg
gtcatattggatgaggcaaaagatgttggtgcaagaaatcgtcgccaacttgcagcaatg
tattgtggtgctaactcagggtttgagttaattcattccctggtggacagaatcatggaa
gtccttgggactccttttgttcctattggagacgatattggttactatattaggcaatca
gatgagtctgaatttcttccgggtagacaagctagcataattttcagaggaaagcacatt
ggaaactttggcattgtgcacccagaggtcttgactaacttcgacatcccagacccttgt
tccttcatggaacttaacattgaatcctttttatag
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