Telopea speciosissima (New South Wales waratah): 122650373
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Entry
122650373 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122650373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122650373
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122650373
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122650373
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122650373
NCBI-ProteinID:
XP_043699722
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Position
2:complement(54450118..54452771)
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AA seq
304 aa
AA seq
DB search
MAKFSVGRDDDDSGEGPSSPIRKKQRRDEAQQKEDDGEEEEEGRRVSHGKGADRDGEDGI
SMTLTDPDVLDCIICLEPLIPPVFQCDNGHIACSTCCTKIANKCPSCSWPIGYSRCLAIE
KVVESIKLSCQNAQYGCKERVSYAQKLNHEETCIYAPCACPLLDCTFFGSFEQLSRHFTC
KHWASARRFRYNCPFPISIDKSEQFLVFQEEEDGLLFLLNNHIEIIGNSISVTCIGTSSS
KGGFFYDLISRRGSSSLKLQSYTKFAKGQVEGSSMDFLLIPTDFNGCYGQLKLEVCIWSS
REFE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattctcggttgggagagatgatgacgacagcggcgaagggccgagcagcccc
attaggaaaaagcagaggagagatgaagcacaacagaaagaagatgatggcgaagaagaa
gaagaagggagaagggtgagtcatggaaaaggagcagacagagatggagaagatggcatc
tccatgaccctaaccgaccctgatgtgctggattgtatcatatgcttggaacccttgatc
cctccagtctttcagtgtgacaatggacacattgcatgctctacatgctgcaccaagatt
gcgaacaaatgtccctcttgctcttggccaattggttacagccgctgcctggccattgag
aaagttgtcgaatcaatcaaactatcctgccaaaatgcacaatatggctgcaaagaaagg
gttagctatgctcaaaaactaaaccatgaggagacatgcatctatgcaccctgtgcatgc
cctcttttggactgcaccttctttgggtcatttgaacaactttcacggcacttcacttgc
aaacattgggcttctgctagacgtttccgttacaactgccctttccctatttctatagac
aaaagtgagcagttccttgttttccaagaggaagaggatggtcttctctttctcctcaat
aaccatattgaaattattgggaattcaatctcagtaacttgcattggaacaagctcctca
aagggagggtttttttacgatcttatttcaagaagaggcagcagctctcttaagttacaa
tcttacacaaagtttgctaaagggcaggttgaaggttcatccatggattttcttctcatt
cccactgacttcaatggttgttatggccagctcaagttggaggtttgtatttggagttct
agagaatttgaatga
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