Telopea speciosissima (New South Wales waratah): 122650470
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Entry
122650470 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122650470
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122650470
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122650470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_THOC3
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR3_1st
WD40_CDC20-Fz
zf-C3HC4_3
Beta-prop_WDR5
zf-C3HC4
WDR55
WD40_Prp19
zf-RING_11
zf-RING_5
Zn_ribbon_4
zf-UDP
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
122650470
NCBI-ProteinID:
XP_043699819
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All DBs
Position
2:13233902..13266699
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AA seq
640 aa
AA seq
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MPYNFPLSEWMEDDATAATPDLVDFVELAQDSEEEEEEEERDEDYVPPIRMERVSRNHSS
NSVQSVTLLGAEEVNVSTSQVPQNATEVVDVEDDYGRREQGEASSSSARKVEREEIDDGE
LLHWSDLDGTSCSICMEPWSAEGDHKLCCLPCGHLYGKSCVERWIIQCGRNNAKCPQCNK
KYTLSAIRVLYASRVVAVDDNTQKKVACLEDEVRSLKSRLESSESRFEHAEKSIASILAE
TKTKGTCLVIASPGQVQRRPSEFIAVPGGSQGQILSEQTIGVGSQGSSRCSFEFKHEFLV
DGARIFGMDASSSLLLIGRRLPGMGGMHVLTKISLIHPDEREDLHLPHNTKAVKDIHVSP
SSSRLALLASLGKKLSILSMERNNYVLTYDLPAPAWSCSWDLNCSHHIYAGLQNGMIQVF
DMRQTIGPIKSFNGLSYHPVHTIQSLVHDSAVLYGGSTLLSASSVGPCVWNTGVVGQRPS
LIPGMENQGVCISLAYSPMSDDIIATFRPKVETFNDTIGTQPSFSPSPSALGQGVQGSHV
HVKRIGSSCYQSLGSTLTYVNGVRLSKSVIINLENCNPLLAYGDEATRSMKIWDLSSLRV
IQTLEQHQHPIIDVKYASWGTGLLGYISEDKLELFSTRLS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacaactttcctctctctgaatggatggaagacgatgcaaccgcagcgacaccc
gatttagtagatttcgtagaattagcacaagattctgaagaagaagaagaagaagaagaa
agagatgaagattacgttccgcctataagaatggaaagggtttcacggaaccattcttca
aattccgttcaatccgtaacacttttaggcgcagaagaagtaaatgtctcgacttctcag
gttccccaaaacgcaactgaagttgtcgatgtagaagatgattacggaagaagagaacaa
ggagaagcgtcttcctcgtcggccaggaaagttgaaagggaagaaattgatgacggggaa
ctgctacattggagcgatttggatggtaccagttgctctatatgcatggagccttggtct
gccgaaggcgatcataaactctgctgtcttccttgtggacatttatatggcaagtcttgc
gtagagcgatggattatacaatgtggaagaaataatgcaaagtgtcctcaatgcaataag
aagtacacattgagtgctatcagggtgctttatgcatcacgagtagtggctgttgatgat
aacacacaaaagaaagttgcatgtcttgaggatgaagttagatcccttaaatctagactt
gaatcttctgagagtaggtttgaacatgctgagaagagtattgcgtccattttggcggaa
acgaagactaagggaacttgcttggtgattgcgtctccgggacaggtgcaaaggaggcca
tctgaatttattgctgtgcccgggggctctcaaggacaaatattatctgaacaaaccatt
ggtgttggcagtcaaggatcttcccgttgcagttttgaatttaagcatgagtttctggta
gacggtgcaaggatttttggtatggatgcatctagctcacttctgcttattggacgaagg
cttcctggaatgggtggaatgcatgtgcttaccaagattagcttgattcatccagatgaa
agagaagatcttcaccttccacataatacaaaagcagttaaagacatacatgtttcccct
tcttctagcaggcttgcacttttggcttccttggggaagaaattgtcaattctcagcatg
gaaaggaacaactatgtcctcacatatgatttaccggcgcctgcttggtcatgttcatgg
gatctcaactgttcacatcacatatatgctggactacagaatggcatgattcaggtgttt
gatatgcgacaaaccatagggcctattaaatcctttaacggactgagttaccatcctgtt
cataccatacagtctcttgtgcatgattcagccgttctttatggtggcagtacactccta
agtgcttcttcagttggtccatgcgtatggaacacaggcgtcgttggacaaaggccatct
ctgattcccggaatggagaaccaaggagtctgtatatcacttgcctattcacccatgagt
gatgacattatagctacatttcgtcctaaagttgagacattcaatgataccatcggtact
cagccatcgttttctccttctccttcagctcttggacaaggggtacaaggttcccatgtc
catgttaagcgaatagggagcagctgttaccaaagcttgggttctacgttaacctatgta
aatggtgtgcgattgtccaagtccgtaattataaatctagagaattgcaatcctctttta
gcatatggggatgaagcaacccgttcaatgaagatctgggatttgtctagtttaagggtt
attcagactcttgagcagcatcagcatcccattattgatgtgaagtacgcatcttggggc
acaggtttacttggttatataagtgaagacaaactggagctcttctcgacaaggctgtct
tga
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