Telopea speciosissima (New South Wales waratah): 122650577
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Entry
122650577 CDS
T07910
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122650577
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122650577
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Motif
Pfam:
Pectate_lyase_4
Peptidase_S10
Beta_helix
Retrotran_gag_3
NosD
Motif
Other DBs
NCBI-GeneID:
122650577
NCBI-ProteinID:
XP_043699913
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Position
2:24211320..24222198
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AA seq
560 aa
AA seq
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MDPVADEKAFFGEHPKYTENGFFITGESYVGHYIPAFAARVHQGNKAKEGIPINFKYQAY
TDYALDNGIIQESDYKSINKLLPACETSNTSNAAAATLIVLLTPNDKILKMSTQMNYAAL
IKDHVLTGPNYVDWRRNIMFLLSAKGLMSVLDEDEPEFPNEENLESKSAYELFRQKNSKA
HIAADFDGALTRRSSLQQKEEVEAGGPCQATNPIDSCWRCQANWEMNRKSYAKCALGFGR
KTRGGENGRIYVVTDPSDSDMVNPKNGTLRYGVIQKEPLWIIFAHDMTIRLTQELMMTSN
KTIDGRGANVHIANGAGITIQFVHDIIITNLHIHDIKATNGGDIRDSVDHHGQRTASDGD
GINIFGSTNIWIDHLSMSNCKDGLIDAVMGSTTITISNNYFSSHDHVLLLGANDTYADDE
KMQVTVAFNHFGPGLVQRMPRVRWGFAHVVNNDYTHWEMYAIGGSTHPTILSQGNRFVAS
DSSTAKEVTHRDYATQDVWKNWNWRSEGDLLENGAIFVQSGSPLKESFSSEDMISPKPAT
SVPELTRFAGALNCTVGKPC
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggacccggtggctgatgagaaggcattttttggtgagcatcctaaatacacagagaat
ggcttcttcattactggagaatcatatgttgggcactacattcctgcttttgccgctcga
gttcaccaagggaacaaagctaaagaggggattcctataaacttcaagtaccaagcatat
acagattacgcattggacaatggaataattcaggaatctgactacaagagtattaacaaa
ttgcttccagcttgtgaaacgagcaatactagtaatgctgctgctgctactctcatcgtg
ttgctcactcccaatgataagattttaaaaatgtcaactcaaatgaactatgccgccctt
atcaaagaccatgttttgaccggccctaactatgttgactggaggaggaacatcatgttt
ctcctgtctgcgaaaggtctaatgtctgtcctggacgaagatgagcctgaattccctaat
gaggagaaccttgaatcgaagtctgcctatgagttgtttcgacagaaaaactctaaggcc
catatagcagcggacttcgatggggcgttgacgagaaggtcgtcgcttcaacagaaagaa
gaagtggaggccgggggcccatgccaggcaacaaacccaatagacagctgctggaggtgc
caggccaactgggagatgaatcgaaagagttacgccaagtgcgcgttggggttcggcagg
aagactaggggtggcgagaacggccgcatctacgtcgtcactgacccctccgacagcgac
atggtcaacccaaagaatggcaccctccgttacggtgtcatccagaaggagccactctgg
atcatctttgcccacgacatgaccatccgcctcacccaggagctcatgatgacatccaac
aagaccatcgacggccgtggcgccaacgttcacatcgccaatggcgctggtataaccatc
cagttcgtccacgatatcatcatcactaacctccacatccacgacatcaaagccaccaac
ggcggcgatatccgtgattccgtcgatcaccacggtcagcgcaccgctagcgatggcgat
ggtattaacatcttcggatccaccaacatctggatcgaccacttgtccatgtccaattgc
aaggatggactcatcgacgccgtcatgggttccaccaccattaccatctccaataactac
ttctctagccacgatcatgtgttgctgttaggagcaaatgacacctacgccgatgacgag
aagatgcaggtcaccgtagcattcaaccacttcgggccaggattagtacagaggatgccc
agggtccgatggggattcgcccacgtggtgaacaacgattacacccattgggaaatgtac
gccattggtggcagcacacacccaaccatcctcagtcagggcaaccgcttcgtcgcttca
gattcatcgacagccaaggaggttacccatagggattacgcaacccaggacgtgtggaag
aactggaactggagatctgagggtgatctattggagaacggtgccatcttcgtccaatct
ggatccccattaaaggagtccttctccagcgaagacatgatcagcccaaagcccgccacc
tctgtccccgagcttactcgctttgctggtgcactcaactgcacggttggcaagccttgc
taa
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