Telopea speciosissima (New South Wales waratah): 122651102
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Entry
122651102 CDS
T07910
Name
(RefSeq) uncharacterized protein LOC122651102
KO
K13217
pre-mRNA-processing factor 39
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122651102
Spliceosome [BR:
tss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122651102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
DUF3440
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
122651102
NCBI-ProteinID:
XP_043700368
LinkDB
All DBs
Position
2:74389538..74420963
Genome browser
AA seq
1081 aa
AA seq
DB search
TVDCDEGKLQDLVAKGPEAFDAWISLIEEIEKTSPDDIGKISLVYESFLSQFPLCYGYWK
KYANHKARLSTFDKVVEIYEQAVQSATYCVGLWVDYCSFGMLLFEDPLDIQRLFERGLSF
VGKDYLCYQLWDKYIKFEYSQKQWSSLAYIYIQTLRFPTKKLHSYYDSFKKLVSIWEEEI
GCQSACITREQSEALANIEIREDSAFQNEEILAVINDLVDPAVGLRRAEALQKYLSAGEL
LYQKASQMDAKIHCFESHVLGSYFHVKPLDASQLENWHHYLDFVEMQGDFDWTVKLYERC
LIACAYYPEFWMRYVEFMETSGGREIANFALVRATQVFLKQQVPAIHFFSARFKEQIGDV
FGSRAAFLKNNLELGSAFIDYVVKEANMEKRLGNFGAASDIYEKALEMATEKQNLHTLSI
LYVQFSRFKYMITGSIDAAREVFMKGIEHAPYSKLLLEGLINFEMMHRGPRETSIIDSIV
AKAVSSEAEISQGLTAEDREDISSLFLEFVDLCGTIHDIRKAWDRHKKLFPHLLRPASCK
SLVSEDWNLKKSMEGRQNFPVAVPHHVSEEDGSHDSVKHLQQNQKVSLPENPVILSSQAV
TDQPQSEEDNNDTQKRIQQVGSPKVLEEEHGKYATNQSPISDDAVLKAAYDPQVPQPMQE
HHKREDEVQKEPDMESKVDLRPPSLESLSLEAQDFAPTRSHDHEGPEETSSSDGNRPKNG
GVSSMSSPPCIQSDDLAHFHLQKNYGPLHAESNPGSLQEQAYSQPLAPKSSASSHNAGGK
WRRMNKTALSTGDANYGFHGYPQLQQPQQWQVSPQQQIQPIEMQSQIVMNQVYPCQPLSE
PNSQVQHNGQAQNQYQPSATQVYAGAAGTHIWHAQNVQQQSFASVPQTQQVAQLVTHAQA
NVYPYPVQSTEQHGHMQNNQAYAHQMWQYYYQQQLYQQQYQQHLQYQQQQPQQSLQQQPQ
HSLQPQPQHHWLQQQQPQPFLQQLHYQQQPQPFLQQQHYQQQPQPSPQQQQPPPQSQPQP
QPEQQQQQQQQQQQHAQITPSQLPAWTNNCYQQVQGATENNIEAPGHGVYPHAQQQPSSN
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
acagttgactgtgatgagggaaaacttcaggacttagttgctaaaggtccagaagctttt
gatgcatggatttcacttattgaagagattgaaaagacatcacctgatgacataggaaag
atatctttggtgtatgagtctttcctatctcagtttcctttgtgttatggttactggaag
aagtatgctaatcacaaggcacgcttatccacctttgacaaggttgttgaaatttatgag
caggcagtgcaatcagcaacttactgcgttggtctgtgggttgattactgtagctttggt
atgttgttgtttgaagatccacttgatatccaaagattatttgaaagaggattatccttt
gttggaaaggactacttgtgctatcaactgtgggataaatatatcaaatttgagtattct
cagaagcaatggagttccctggcttacatttacatccagactctacgatttccaacgaaa
aagttacatagctattatgatagttttaagaagttggtttccatttgggaagaagagata
ggatgccagagtgcctgtatcacaagagagcaatcagaagctctagctaatattgagatc
agggaggattcagcttttcaaaatgaggaaatacttgccgtcatcaatgaccttgtggat
ccagcggttggcttgcgtagggctgaagcattgcagaaatatttatctgctggagaactt
ctctatcagaaagcaagtcagatggatgcaaagatccattgctttgagagtcatgtactt
gggtcttatttccatgtaaaaccgcttgatgccagtcagttagaaaattggcatcactat
ctggactttgttgagatgcaaggagattttgattggactgtaaaattatatgagagatgc
ttaattgcctgtgcctattaccctgagttctggatgcgttatgttgaattcatggaaact
agtggtggaagggagatagcaaacttcgcccttgttcgagcaacacaagtttttctaaag
cagcaagtgccagcgatccattttttcagtgcaagatttaaggagcaaattggagatgta
tttggttcccgtgctgcatttcttaaaaacaatctggaactaggctctgctttcattgat
tatgttgtaaaggaggctaatatggaaaaacgtctgggaaattttggagcagcctctgat
atatatgaaaaagcacttgaaatggcaacagagaagcagaatttacacacactttccatt
ctttatgttcaattttctcgctttaaatacatgatcactggtagcatagatgctgctaga
gaagtctttatgaagggtatcgaacatgccccttacagcaaattacttctggagggatta
ataaactttgagatgatgcaccgaggaccaagagagacaagcatcatagactctattgta
gctaaagcagtatcttcagaggcagaaatatcacaaggcttgactgctgaagatcgtgag
gacatttcaagtctatttttggagtttgtggacctttgtgggactatccatgatatcagg
aaggcatgggatcgtcacaaaaagctctttcctcatttattgaggcctgcctcatgtaaa
tctctggtcagtgaggattggaacttgaaaaagagcatggaaggaagacagaattttcct
gtggctgtgcctcatcatgtttcagaagaagatggttctcatgattcagttaagcatttg
cagcaaaaccagaaggtatcactgcctgaaaatcctgttatcctttctagtcaggctgtc
actgaccaaccccaatcagaagaagataataatgatacgcagaagagaatacaacaggtg
ggatcacccaaagttttggaagaagaacatggaaaatatgcaacaaatcagagtccaatt
agtgatgatgccgtgcttaaagcagcatatgatcctcaagttccacagcctatgcaagaa
caccacaaacgagaagatgaagttcagaaagagcctgacatggagtccaaagttgatctt
agaccaccttcactggagagtctttcattagaagctcaggattttgctcccactagatct
catgaccatgaaggccctgaagaaacctctagttcagatggaaataggccaaagaatggt
ggtgtctcttctatgtccagtccgccatgcatacaatcagatgaccttgcccattttcat
cttcaaaagaattatggccctttacatgcagaaagtaatccaggttctttgcaagaacag
gcatactcacagccacttgcacctaaaagcagcgcatccagtcataatgctggaggaaaa
tggcgtcgtatgaataaaactgcactatctactggagatgccaattatgggttccatggg
tatccgcagctccagcagcctcaacaatggcaggtttccccacagcaacagatccaacca
attgaaatgcagtctcaaatcgttatgaatcaagtttatccttgtcagcctttgtctgag
cccaattcacaagttcagcataatggccaagcacaaaaccagtatcagccatctgctact
caggtgtatgcaggtgcagcaggtactcatatctggcacgcacaaaatgttcagcaacag
agctttgcatctgtacctcaaactcagcaggttgcacaacttgttacccacgctcaagca
aatgtttatccatatccagtgcaaagtactgagcagcatgggcatatgcagaataaccaa
gcatatgcccatcaaatgtggcagtattactatcagcaacagctgtaccaacaacaatat
cagcagcacctacaataccagcagcagcaaccacaacagtctctgcagcaacaaccacag
cactctctgcagccacaaccacagcaccactggctacaacaacaacagccacaacctttt
ctgcagcagctgcactaccaacaacagccacaaccttttctgcagcagcagcactaccaa
caacagccacaaccttctccacagcagcaacaaccaccaccacaatcacaaccacaaccg
cagccagaacagcagcagcagcagcaacaacaacaacaacaacatgcacagattactcca
tcgcagcttccagcatggaccaacaactgttaccagcaggttcaaggagctacagagaac
aacatcgaggcacctggacatggtgtataccctcatgcccaacagcaaccttcctcaaac
cagtaa
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integrated database retrieval system
