KEGG   Telopea speciosissima (New South Wales waratah): 122651264
Entry
122651264         CDS       T07910                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122651264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tss03400]
    122651264
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122651264
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 EDRF1_N RTT107_BRCT_5
Other DBs
NCBI-GeneID: 122651264
NCBI-ProteinID: XP_043700512
LinkDB
Position
2:72418735..72436631
AA seq 389 aa
MSDSKSSRNDGGNKTTGRNIPSWMASGGHGNKSHGKKPADVNIKGKDNDLKNSKETRCSD
KSANGGEATSSTMNFSKLMEGVVFVLSGFVNPERSILRSQALEMGAEYQPDWNSSCTLLV
CAFPNTPKFQQVEADCGTIVSKDWISECYNQKKLVAIERYLMYPGKPWRRNTACPGSGKD
QEATLPRKTEKQVKKRSSPKQSASPKGKGGAPNSAQDRFSPSNLKKWATDDLNKTISWLE
SQEESPEPSEVKKIAAEGILTCLQDSIEALEQKKDIRQVTEDWKFVPHVVEELAGLESAR
SGSESLSKEDLYQQAMICKSIYMMAYDSLEAQPVQKSKKPKTGKDHKQDGDETENKVNHA
AYDSDDTIEMTEEEIDIAYKTIASKLSKC
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtctgattcaaaatcaagccgtaatgatggtggtaataagactacaggtcgaaatatt
ccctcgtggatggcctctggaggtcatgggaataaatcccatggtaagaagccagctgat
gttaatatcaaagggaaagataacgaccttaagaactcaaaggagaccaggtgcagtgac
aagtcagcaaatgggggtgaagctacttccagtactatgaacttctcaaaacttatggaa
ggggttgtctttgtgttgtcagggtttgttaatcctgagcgcagcatattgcgatcacaa
gcattggagatgggagcagaatatcagcctgactggaactcaagttgcacccttcttgtt
tgtgcttttcctaatactccaaagtttcaacaagttgaggcagattgtggaactattgtt
tcaaaggattggatttcagagtgttataaccagaaaaagcttgttgcgattgaaagatac
ctcatgtatcctggaaaaccatggcgaaggaatactgcatgccctgggtctggcaaagat
caagaagctaccctacctagaaaaactgaaaagcaagttaagaaaagatcaagtccaaag
caaagtgcatctcccaagggcaagggaggagctcctaattcagctcaagatcgcttttcc
ccttctaatttgaaaaagtgggctactgatgatttgaataaaaccatctcatggcttgaa
agtcaagaagaaagtccagagcctagtgaagtgaagaaaatagctgcagaagggatactc
acctgtttacaggattctatagaagctcttgagcaaaaaaaggatatccggcaagtgaca
gaggattggaaatttgttcctcatgtggtcgaagaattggcaggactcgaaagtgcaaga
agtggcagtgaatcactctcaaaggaagatctttatcaacaggctatgatatgcaaaagc
atttatatgatggcatatgacagtttagaagcccagcctgtccaaaagagtaagaaacct
aagactggtaaagatcacaagcaagatggtgatgaaaccgaaaacaaagtcaatcatgct
gcatatgacagtgatgatacaatcgaaatgactgaagaagagatagacattgcttacaaa
actatagcttctaagctctccaaatgttag

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