Telopea speciosissima (New South Wales waratah): 122651310
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Entry
122651310 CDS
T07910
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122651310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122651310
Membrane trafficking [BR:
tss04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
122651310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_22
NPHP3_N
AAA_5
NACHT
RuvB_N
AAA_18
AAA_14
nSTAND3
RNA_helicase
IstB_IS21
AAA_7
AAA_19
AAA_33
Mg_chelatase
ATPase_2
Bac_DnaA
AAA_28
AAA_2
TIP49
NTPase_1
AAA_17
ABC_tran
AAA_29
Zeta_toxin
FtsK_SpoIIIE
KTI12
KAP_NTPase
NB-ARC
Sigma54_activat
AAA_23
AAA_lid_PRS2_C
cobW
T2SSE
DUF3987
Motif
Other DBs
NCBI-GeneID:
122651310
NCBI-ProteinID:
XP_043700584
LinkDB
All DBs
Position
2:complement(80499957..80525253)
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AA seq
1134 aa
AA seq
DB search
MDFEVRAVAGIESCFVSLPVSLIQTLQSTRGGFLPSLLALELRSTDNRSWHVAWSGSASS
SSAIEVAQQLAECMSLPHHLMVQVRAVSNLPKATLVTIEPNTEDDWEVLELNSELAEAAI
LKQVGIVYEGMRFPLWLHGRNIIVFLVVSTSPVKSVVQLVPGSEVAVAPKRRKKTMDTCQ
DSYIKPSSKEQLKKALFRVQDPGRISVHRCEFNGVELGVVLTSAVFVHPETAKSALFQNF
QLVIIFPRLPPSQNMKTNKSNNPRKWGSAVKEENPELRIDKENSRHIIVHLLLSDSVAKG
HIMLPLSLRLYLRADLHSWVCVRSCDLDPKKDASLFTLSPCRFKFPRKDKTLNDISLFES
KKKFKTKSTPFGTSLIDDANMMDWSTHEDFITTLSGSYSKGESQQAASQSPISKRQQSLL
QAWFIGQLKAISLNTGMHVSSLGLGNETLLHFEVMGHKIGSNGNIKALTEGPLDKRKMTR
EHPIELLFLLTTPEELFHRGQIGTYELTLKEEKKSIDNLEGLELSFGKLDLGDPVFLHSV
KERTFDKNSDLTISSLNWMETACSEVMNRLTLLLSPTIGKLFSSFNLPLPGHILICGPPG
SGKTSLARAVAKSLEEHEEILAHIVFISCSSLALEKASSIRHTLSSYISEALDHSPSLVF
LDDLDSIFSSSLDSEGSQLSASTTALMEFLTDIMDEHGDKRQRSCGIGPVALVASAQSLE
NLPQSLSSSGRLDFHVQLPAPAVLERAAILKYEMQKRSLKCSDDILSDVASKCDGYDAYD
LEILVDRAVHAAVSRFLSFHSACDECEKPALVMDDFMQAMHDFLPVAMREITKSASEGGR
SGWEDVGGLMDIRSAIQEMVELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA
ACSLRFISVKGPELLNKYIGASEQAVRDIFSKASAAAPCLLFFDEFDSIAPKRGHDNTGV
TDRVVNQLLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSQRERVDI
LTVLSRKLPLASDIDLDAIASMTEGFSGADLQALLSDAQLAAVHELLENDDRDKPGKMPI
ISNDLLKSVASRARPSVSEVEKRKLYGIYSQFLDARKSVDAQSRDTKGKRATLA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaggtaagggccgtggcagggattgagagctgcttcgtctccctccctgtc
tctctgatccaaacccttcaatccactcgtggaggctttcttccttcccttctcgcgctt
gagctccgatctactgacaaccgttcctggcacgtagcctggtctggctcggcatcaagt
tcttcggcgattgaggttgctcaacaattggctgagtgcatgtctctaccacatcatttg
atggtgcaagtgagagccgtttctaacttgccgaaagctacactagttacgatagagccc
aatactgaggatgattgggaggttttggagctcaactcggagcttgcagaggctgctatt
ttgaaacaggttggtattgtgtatgaagggatgcgatttcccttgtggttgcatggccgc
aacatcatagtgtttcttgtggtttcaacatctcctgtgaaatcggtagtgcaacttgtg
ccaggatctgaagttgcagttgcaccaaagagacgcaagaaaaccatggatacctgccaa
gattcttacataaaaccatcaagcaaggagcaattgaaaaaggcattattccgtgttcaa
gatccaggaaggatatctgtccacagatgtgagttcaatggtgttgagctgggcgttgtg
ctcacttctgctgtttttgttcatccagagaccgctaaaagcgcattgtttcaaaacttt
cagctggttatcatatttcctagattaccaccaagccagaatatgaagactaataaaagc
aataacccgagaaaatggggttcagcggtgaaggaagaaaaccctgagttgcggatcgac
aaggagaattctaggcatataattgttcatctgttactttcagattcagtggccaaagga
catataatgcttcctctgtctcttcgtctgtatttaagagctgacttacattcatgggtt
tgtgtaagaagttgcgaccttgatccaaagaaggatgcttctttattcactctttcacct
tgccggttcaagtttcctcggaaggataagaccctcaatgacattagcttgttcgaaagc
aaaaaaaaatttaagactaaatccacacctttcggaactagtttgattgatgatgcaaat
atgatggattggtcaactcatgaagattttattactactctttctggtagttactctaaa
ggtgaaagtcaacaggctgcttcccagtctcctatttcaaaacgacaacaaagtcttctc
caggcttggtttattggtcaactcaaagcaatttcgttaaatacgggaatgcatgttagt
tcattggggttaggaaatgaaaccttgcttcactttgaagtaatgggtcataaaataggg
agcaatggaaacataaaggctttaactgaaggtcctttagataagagaaaaatgactaga
gagcatcctattgaactcttatttctattgactacaccagaagagctttttcataggggt
cagattgggacttatgagcttactctcaaagaggaaaagaaaagcattgataaccttgaa
gggttggaattgtccttcggaaagttggatttgggtgatcctgtatttcttcattctgtc
aaagagaggacatttgataaaaattcagatttgaccatttcttccttaaactggatggag
acagcttgttctgaggttatgaaccggttgactctgctattatctccaactattgggaag
ctttttagttctttcaatcttcctctacctggacatattctcatatgcggacctcctggt
tctggaaaaacatctttagccagggcggttgcaaaatccctcgaagagcatgaagagatc
ttagcacacatagtttttatcagctgttccagtcttgctcttgagaaggcctcaagcatt
cgtcatacactttctagctacatatctgaagcccttgaccattcaccttctcttgtattc
ttggatgatcttgatagtattttttcatcatctttagactccgagggatctcaactttct
gcttcgactactgcacttatggaatttcttacggatattatggatgaacacggggacaag
agacaaaggtcctgtggaatcggccctgttgcattggtggcttctgcacaatctcttgag
aatctgccccagtcgctgagctcttcagggaggttagacttccacgtgcagttgcctgca
cctgctgtcttagaacgtgcggctatattgaagtatgaaatgcagaagcgttccttgaaa
tgttccgatgatatcctgtcagatgtggcttctaaatgtgatggctatgatgcatatgat
ttggaaatattggttgatcgggctgtacatgctgctgttagtcgctttttatcttttcat
tctgcttgtgatgaatgtgaaaagcctgctttggtaatggatgactttatgcaagcaatg
catgatttccttccagtagctatgcgtgaaattactaaatctgcttctgaaggtggtcgt
agtggttgggaagatgttggtgggcttatggacatcagaagtgctattcaggagatggtt
gaattgccatcgaagttccccaatatctttgcacaagctcccttaaggttaaggtcaaat
gttctgttatatggcccacctggttgtggaaagacacacattgttggtgctgctgctgct
gcatgttctttacgatttatatctgtgaaagggcctgagctgctgaacaaatacatcggt
gcttctgaacaagctgttcgggatattttctcaaaagcatccgctgcagctccttgcctt
ctcttttttgatgaatttgattccattgctcctaagagaggacatgataatactggagtt
actgatcgtgttgttaatcaactgctgactgaactagatggtgtggaagtccttacagga
gtatttgtgtttgctgcaacaagtcgaccggatttacttgatgctgcacttttgcgacct
ggaaggcttgatcgtctccttttctgtgacttcccatcacagcgtgagagagtggacatt
ctaactgttctttctagaaagcttccactagccagtgatattgatctggatgccatagct
tctatgactgaaggttttagtggtgccgatctccaagcactcctgtcagatgcacagctt
gctgcagttcatgaacttctggaaaatgatgatagagataaacctggaaaaatgccaatc
attagtaatgatcttctaaaatctgttgcttcaagagcaagaccttctgtttcagaagtt
gaaaagcggaaactatatggtatttacagccagttcctggatgcaagaaaatctgttgat
gcacagtcaagggacactaaggggaaaagggcgaccctagcataa
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