Telopea speciosissima (New South Wales waratah): 122651338
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Entry
122651338 CDS
T07910
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122651338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tss02000
]
122651338
04147 Exosome [BR:
tss04147
]
122651338
04090 CD molecules [BR:
tss04090
]
122651338
Enzymes [BR:
tss01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122651338
Transporters [BR:
tss02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122651338
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122651338
CD molecules [BR:
tss04090
]
Proteins
122651338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
RsgA_GTPase
AAA_16
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
122651338
NCBI-ProteinID:
XP_043700621
LinkDB
All DBs
Position
2:7478493..7513710
Genome browser
AA seq
1403 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDNNEAVPVEDEQEIEEAEEIEPPPA
AVPFSRLFACADGFDWFLMVVGSLAAAAHGTALVVYLHYFGKVIQLLDWHNSSGGPEELF
QRFTEHALYIIYIASGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGN
NGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVVGLINCWEIALITLATGPFIVA
AGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRY
GILISLVQGLGLGFTYGLAICSCALQLWVGRFLILHGKAHGGEIVIALFAVILSGLGLNQ
AATNFYSFEQGRIAAYRLYEMISRSTSSVNQDGNILASVQGNIEFRNVYFSYLSRPEIPI
LSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKSLKLDWLRSQ
IGLVTQEPALLSLSIRDNIAYGRSNVTSDQIEEAAKIAHAHTFISSLEKGYETQVGRAGL
PLTEEQKIKLSVARAVLSNPSILLLDEVTGGLDFEAERVVQEALDILMLGRSTIIIARRL
SLIRNADYIAVMEEGQLVEMGTHDELLALDGLYAELLRCEEAAKLPKRTPIRNHKEITTF
QIEKDSSASHSVQEPSSPKMAKSPSLQRVHGGHAFRSSDGTFSSQESPKVQSPPSEQMLE
NGMALDAAEKAPSIKRQDSFEMRLPDLPKLDVHPEHRQVSSNASDPESPISPLLTSDPAN
ERSHSKTFSRPLSQFDHMPVKLKQPKDTQHQKPPSFWRLAELSFAEWLYAALGSTGAAIF
GSFNPLLAYVIALIVTAYYGPSKGANLSHEVDKWSLIIACMGIVTVVANFLQHFYFGIMG
EKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDTA
AVVVAVLIGMLLEWRLALVALATLPILIVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAV
RNIYTVVAFCAGNKVMELYRFQLGKIFRQSLIHGMAIGFAFGFSQFLLFACNALLLWYTA
ISVKRGYMDLPTAIKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDSD
DNSGLKPPNVYGSIELRNVDFCYPTRPEVMVLRNFSLKVSGGQTVAVVGVSGSGKSTIIS
LIERFYDPVAGQILLDSRDVNLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNATEA
EMKEAARIANAHHFISSLPHGYDTHIGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS
SSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNCGRIVEQGTHDSLVA
ANGLYVRLMQPHFGKGLRQHRLV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcaagagggcttttcggctggtctccgccgcacatacaaccgttaacaccc
gtttcggaagtatcagaaccccctgagtctccgtcgccatacttggataacaatgaggca
gtgcccgtggaggatgaacaggagattgaggaggcggaggagatcgagccaccgcctgct
gcggttcctttctcgaggctttttgcttgtgccgatggcttcgactggtttttgatggtt
gttggttctttagctgctgcggctcatgggacggcccttgttgtctacttgcattacttt
gggaaggttattcagctccttgactggcataactcctctggtggtccagaagagctattt
cagaggtttacggagcatgctttatacattatctatatagcatcaggtgtttttgctgct
gggtggattgaggtctcgtgttggatcctgactggagagaggcagactgcagtcatcagg
tcaaagtatgtacaagtattactcaaccaggacatgagtttttttgacacgtatgggaac
aatggtgacattgttagccaagtactgagtgatgtgctgctcattcagtctgctcttagt
gagaaagttggaaactatatccataacatggcaacgttttttagtggcctggtggttgga
ttgatcaactgttgggagattgcactcatcacattagcgactgggccatttattgttgct
gcaggaggaatatcaaacatatttctccacaggcttgctgaaaatattcaagatgcatat
gctgaggctgcgagcattgctgagcaggcagtctcctacattaggaccttgtatgcattc
acaaatgaaacattggccaagtactcttatgccacttcactccaggcgacactgagatat
ggtatacttataagtctggtgcaaggtcttggacttggatttacatatggacttgcaata
tgttcttgtgctttgcaactttgggttggaaggttcctaattttgcatggaaaagcccat
ggtggtgaaattgtaatagctctcttcgctgtgattttgagtggccttggtctaaatcaa
gcagcaacaaacttctattcatttgagcaagggcgaattgctgcgtacagactctatgag
atgataagccgttcaacttcttctgttaatcaggatggaaatatcttagcatctgtgcaa
ggaaacattgaattccggaatgtgtatttcagctacctctctcgtcctgaaatccctatc
ttaagtggtttttacctaactgtaccagctagaaaaactgtggcacttgttggcaggaat
gggtcaggaaaaagcagtataattcctctcatggaacgattttatgatcctacattagga
gaagtacttctggatggtgagaacattaaaagcttgaaactggactggttgagaagccaa
ataggacttgtcacgcaggaacctgccttgctaagtttgagcattagggataatattgct
tatggacggtccaatgttacttctgatcagattgaagaagctgctaaaatagcacatgct
catacttttatcagctcgcttgagaaaggatacgagacacaggttggtagggcaggttta
ccattgacggaagaacagaaaataaaactttctgttgctagagcagtactttcaaatcca
tctattcttttacttgatgaagtcactggtggccttgattttgaagcagaaagggttgtt
caggaggctttagacattctcatgttgggacgttcaactataataatagctcggcggctt
agccttataaggaatgctgattatatagctgtgatggaggagggccaacttgttgaaatg
ggtacacatgatgaattgctagctcttgatggcctatacgcagaacttctcagatgtgaa
gaagcagcaaagcttcctaagaggacgcctataaggaatcacaaggaaatcacaactttc
caaattgaaaaggattcttcagcaagtcacagtgttcaagaaccatcatctcctaagatg
gcaaaatcaccctctcttcagagagtgcatggaggtcatgcattccggtcctcagatgga
accttcagctcgcaagaatcgccaaaagttcagagcccaccgtcagagcaaatgttggaa
aatggaatggccttggatgctgcagaaaaggccccatccataaaaaggcaggacagtttt
gaaatgaggttgccagatctacccaagcttgatgttcatcctgaacatcggcaggtgtcg
tcaaatgcttcagatcctgaatcccctatttcaccacttttgacatctgatcctgcaaat
gaacgctcccactcaaagacctttagtcgacccctcagtcaatttgatcatatgcctgtg
aaactgaagcagccaaaggatacacaacatcagaaacctccatcattttggaggcttgct
gaacttagttttgcagagtggctttatgctgctttagggagtactggtgctgcaattttt
ggttcatttaacccccttcttgcttatgtcattgcactgatagtgacggcgtattatgga
ccaagtaaaggtgccaacttaagccatgaagtggacaaatggtccctgatcattgcctgc
atgggtattgtcacagtggttgccaattttttgcagcacttctattttggcatcatggga
gaaaaaatgactgaacgagttaggagaatgatgttctcagcaatgttgcgtaatgaagtt
ggatggtttgatgaagaggagaacagtgctgacaacttatccatgcgtttggcaaatgat
gctacatttgtacgtgctgctttcagcaacaggctttctatatttatccaagacaccgca
gctgttgttgtggctgttctcatagggatgctactggagtggcggctggcacttgtggct
ttggcaaccctacctattcttattgtttctgctattgcacagaagttgtggcttgctggg
ttctcaagaggcatacaagaaatgcataggaaggcatctttggtccttgaggatgctgtt
agaaacatctacactgtggtggcattctgtgctggtaacaaggtgatggagctctacaga
tttcagctggggaaaatattcagacagagtttaatccacgggatggccattggttttgcc
tttggattttcgcagttcctgctttttgcctgtaatgccctcctcctctggtacactgcc
atctccgttaaaaggggttatatggacctgcccactgctatcaaggagtatatggtcttc
tcctttgcgacttttgcgcttgtggagccatttgggctggctccatacatacttaagcgg
cgcaaatctcttatttcagtatttgagatcatagatcgtgtccctaagattgattcagat
gataattcgggactaaagccgcctaatgtgtatggaagcatcgaattgagaaatgttgat
ttttgttatccaactcgtcctgaggtgatggtattgagaaatttcagtctcaaagtcagt
ggaggacaaactgtagcagtagtaggagtttcaggttctggaaaaagcactataatctct
ttgatagagagattctatgatccagtcgctggtcaaattttactggatagcagagatgtg
aacctgtataaccttaggtggttgaggagccacttgggtcttgttcagcaggagccaatt
atcttttcaacaactataagggagaacatcatttatgcaaggcacaatgctactgaggct
gagatgaaagaggcagcaagaatagctaatgctcaccatttcatcagtagcttgcctcat
ggttacgacacacatattggcatgaggggtgtcgatctaacaccaggacagaagcagaga
attgccattgccagggttgtgctaaagaatgctccaatcttattattagatgaggccagc
tcctcgatcgagtctgagtcaagtcgtgtggttcaggaagcgcttgataccctgataatg
ggaaacaagactactattcttattgcccatagagcagcaatgatgagacatgtagacaac
attgtagttctcaattgtggacgtatcgtggagcaaggaacacatgattctctggttgca
gctaatggtctgtatgtccgattgatgcaacctcactttgggaagggcttacgccagcat
cgacttgtctag
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