KEGG   Telopea speciosissima (New South Wales waratah): 122651346
Entry
122651346         CDS       T07910                                 
Name
(RefSeq) SART-1 family protein DOT2 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122651346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122651346
   04121 Ubiquitin system [BR:tss04121]
    122651346
Spliceosome [BR:tss03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    122651346
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122651346
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 122651346
NCBI-ProteinID: XP_043700635
LinkDB
Position
2:complement(78696666..78716786)
AA seq 947 aa
MEMDGAESRLEQNDDSMDQNGSARGDYRDEELLDGFEGDVGEKPRESSKHRSKDRKKSRK
EEKDHGSRDRERSKAADVSKESDKVVKDSEKDRVSSRERRKEDREDREKDRHKDKEREKD
YDLDKYKDKDREKDKDRKDKGKDKDREREREGEKDHDRGREKERGKEKDRERDKERDRAK
DRDREKERDKHKVREKEKEREREKEKERDKHDRDKAKDKSREKEREKDREKDGDKEGSKD
KERDKMTGKIRIEGQGRGKDGGKDERPKTEGMNDGDVTVLGKETEHEDSDISGMEHNQQT
EWASGPSKSELEERILRMKEERLKKKSEGASEVLAWVNKSRKLAEKRNVEKEKAMHLSKV
FEEQDNIDEGESDDEEAARHTAKDLAGVKVRHGLDKVIGGGAVVLTLKDQNILTNGDINE
EADVLENIEIGEQKQRDEAYKAAKKKTGIYEDKFSNEDGSQKKMLPQYDDPVEDEDVTLD
DGGRFSAEAEKKIEELRKRILGVSASNHSEDLNSSGKISSDYYTHDEILQFKKPKKKKSL
RKKEKLDLDALEAEAITAGLGMGDLGSRKDGKRKAAKEDQEKSEAEIRNNAYQTAYAKAE
EASKALRQEQTLTVKVAEDENPVFGEDDEDLYKSLETARKLALKKQNQAAASGPQAVALL
ASTANNQSSDDHNSAYEEPQENKVVFTEMEEFVWGLQLDEEAHKTDDHDVFMDEDEVPKS
SDQEKKDEAGGWMEVKDTDKDEHPINEEKEEIVLDETIHEAAVGKGLSGALKLLKERGTL
KETVDLGGRNMDKKKSKLVGIYDNDGRKEIRIERTDEFGRIMTPKEAFRVISHKFHGKGP
GKTKQEKRMKQYQEELKLKQMKNSDTPSLSVERMREAQARLKTPYLVLSGHVKPGQTSDP
RSGFATVEKDLAGGLTPMLGDKKVEHFLGIKRKAEPGDGGASKKLKN
NT seq 2844 nt   +upstreamnt  +downstreamnt
atggagatggacggggctgaatcgagactggagcaaaacgatgacagtatggatcaaaat
gggtctgctaggggagattacagagatgaagaactgcttgatggttttgaaggagatgtc
ggtgagaaaccgagggaatcaagcaagcaccggagcaaagacagaaagaagagtcgaaaa
gaagagaaggatcatggaagtagggatcgagaacggtcaaaggccgctgatgtttcgaag
gagagtgacaaagtggttaaggattcagaaaaagaccgggtttcaagtagagagaggaga
aaggaggatagagaggaccgtgagaaggataggcacaaggataaagaaagggagaaagat
tatgaccttgataagtacaaagacaaggaccgtgagaaggataaagataggaaagacaaa
gggaaagataaggaccgtgaaagggagagagagggggagaaagaccatgatcgagggcga
gagaaggagaggggaaaggagaaggacagggaacgtgataaggagcgggatagggcaaag
gacagggacagagaaaaggaaagggataaacataaagttcgagagaaggaaaaggaaagg
gaaagggaaaaggaaaaagaacgtgataaacatgacagggataaggccaaagacaaaagt
agggagaaggaaagagagaaagatagagagaaggacggagacaaagagggttctaaagat
aaagaaagagacaaaatgaccgggaaaattcgtattgaaggccaaggtaggggtaaagat
ggtggaaaagacgaaagacctaaaacagagggtatgaatgatggagatgtcactgtgctg
gggaaggaaaccgagcatgaagatagtgatatcagtggcatggagcataatcagcagacc
gagtgggcatcagggccatcaaaatcggagcttgaagagcggatattgagaatgaaagaa
gaaagattgaagaaaaagtctgaaggtgcttcggaagttttagcgtgggttaataagagc
cgtaagctggcagagaaaaggaacgttgaaaaagagaaagccatgcacctttccaaggtt
tttgaagagcaggacaatattgatgaaggagaaagtgatgatgaggaagcagctcggcac
actgcaaaggatctagctggagttaaagttcgtcatggtcttgataaagtaattggaggt
ggagctgttgttttgactcttaaagatcaaaacatactcaccaatggtgatatcaacgaa
gaggctgatgtactagaaaatattgagattggagagcaaaaacagagagatgaggcttat
aaggctgcaaagaaaaagactgggatatatgaggacaagttcagcaatgaagatggttcc
caaaagaaaatgcttccacagtatgatgatcctgttgaagatgaggatgtgactttggat
gacggtggacgctttagtgccgaagcagagaagaagatagaagagctccgtaaaaggata
ctgggagtatctgcaagcaatcattctgaagatctcaattcttctgggaaaatttcatca
gattactatacgcatgacgaaattctccagtttaaaaagccaaagaaaaagaaatccctg
aggaagaaggaaaagctggatttggatgccctagaagctgaggctataactgctgggttg
ggcatgggtgatcttggctccaggaaagatgggaagaggaaagctgccaaggaggatcaa
gaaaaatctgaggctgaaataaggaataatgcataccaaacggcttatgctaaagcggaa
gaggcatctaaagcactccgacaggaacaaactctaactgttaaagttgcggaagatgaa
aatcctgtttttggtgaagacgatgaggatctctacaaatctttagaaacagcaagaaag
ttagcacttaaaaagcagaatcaggcagcagcatctggtcctcaagcagttgcacttctt
gccagcactgccaacaatcaatcaagtgatgatcataactctgcatatgaagaaccacaa
gaaaacaaggttgtcttcacagagatggaagagtttgtatggggtctccagcttgatgaa
gaagcccataaaactgatgatcatgatgttttcatggatgaagatgaagttcctaaatcc
tctgaccaggaaaaaaaagatgaagctggtggttggatggaggtcaaagatactgataaa
gatgaacaccctattaatgaagagaaagaagaaatagttttggatgagactatccatgaa
gctgcggttggtaaaggattatcaggagcactgaagctacttaaggaacgaggaacgctg
aaggagactgtagacttgggtggcagaaacatggacaagaaaaagagcaaacttgttggt
atctacgacaatgatggacgtaaggaaatacgtattgagaggacagatgaatttggtcgg
attatgacccctaaggaggcctttcgggttatttctcataaatttcatgggaaggggcca
ggcaaaactaagcaagaaaaacgcatgaagcaataccaagaagagttgaaactaaagcag
atgaagaattctgacacaccatcactgtctgtggagagaatgagggaagctcaagctcgt
ctaaagacaccctatcttgtgcttagtgggcatgtaaaacctgggcaaaccagtgacccc
agaagtggttttgctactgttgagaaggaccttgcggggggtttgacacccatgcttgga
gataagaaggttgagcatttcttggggatcaagcgcaaggctgaacctggtgatgggggt
gcgtcaaagaagctgaagaactaa

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