Telopea speciosissima (New South Wales waratah): 122651359
Help
Entry
122651359 CDS
T07910
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03082
ATP-dependent chromatin remodeling
tss03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122651359
03083 Polycomb repressive complex
122651359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122651359
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122651359
Histone modification proteins
HAT complexes
HATB complex
122651359
HDAC complexes
Sin3A-HDAC complex
122651359
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122651359
PRC2.2
122651359
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122651359
Heterochromatin formation proteins
Other heterochromatin formation proteins
122651359
Chromatin remodeling factors
NuRD complex
122651359
NuRF complex
122651359
NuRF complex (fruit fly)
122651359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_TEP1_C
MIOS_WD40
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
122651359
NCBI-ProteinID:
XP_043700662
LinkDB
All DBs
Position
2:78210032..78229942
Genome browser
AA seq
424 aa
AA seq
DB search
MAKDEDEFRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARQYEDERGEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTE
GYGLSWSLFKQGHLLSGSDDAQICLWDVNATPKNKVLEAQQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDHHLLIWDLRTPSANKPIQSVVAHQGEVNCLAFNPFNEWVVVTGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPAEES
AKAS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggacgaggacgaatttaggggagagattgaagaacgattgatcaacgaggaa
tacaagatatggaagaaaaatacaccgtttctgtacgatttggtcatcactcatgctctg
gaatggccttcgttgaccgtacaatggctcccagacagggaagagcctccagggaaggat
tactctgtgcagaagatgatattgggtacccacacttcggagaatgagcccaactatctg
atgcttgcccaggtgcagcttcccttggaggatgctgagaatgatgcccgacagtatgaa
gatgagcgtggggaagttgggggttttggttgtgctaatggaaaggtacaaataatacag
caaataaatcatgatggagaggttaatcgggctcgttacatgccacaaaatccatttatt
attgcgaccaagacagtcagtgcagaggtttatgtttttgattacagcaaacacccatct
aagcctcctctagatggtgcatgcaatcctgatttgaggctgaggggccacagtactgaa
ggttatggtttatcgtggagtctgttcaagcaaggtcatttactgagtggttctgatgat
gctcagatatgcttgtgggacgttaacgctactcctaagaataaggttcttgaagctcag
caaatttttaaggttcatgaaggtgttgttgaagatgttgcatggcatctgaggcatgaa
tacctgtttggttcagttggggatgatcaccacctgcttatatgggatctacgtacacca
tcagccaataaacctatccagtctgtggttgctcatcaaggtgaggttaactgcttagca
ttcaatccgtttaatgaatgggtcgtggtgacgggttcaactgataaaactgttaagcta
tttgacctccggaagatcaatactgcacttcacacctttgattgtcacaaagaggaggtt
ttccaagttggttggaatccaaagaatgagaccatattggcctcttgctgtcttggtagg
cgacttatggtgtgggatctcagcaggattgatgaagagcaaacgccagaggatgcagag
gatggtccgccagagctgcttttcattcatggggggcacacaagcaaaatatctgacttc
tcatggaatccttgtgaagattgggttatttctagtgtggcagaagataacatacttcaa
atctggcagatggcagagaacatctaccatgacgaagatgatctaccagctgaggaatct
gccaaagcttcttag
DBGET
integrated database retrieval system
