Telopea speciosissima (New South Wales waratah): 122651492
Help
Entry
122651492 CDS
T07910
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122651492
03015 mRNA surveillance pathway
122651492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122651492
03041 Spliceosome [BR:
tss03041
]
122651492
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122651492
Spliceosome [BR:
tss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122651492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
122651492
NCBI-ProteinID:
XP_043700823
LinkDB
All DBs
Position
2:complement(1264292..1273901)
Genome browser
AA seq
914 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKIDTIKPWIAKRVTELL
GFEDEVLINFIYGLLDRKEVNGKEVQIQLTGFMEKNTGKFMKELWTLLLSAQNNASGIPQ
QILDATDEELRKKKAEADRITHEIQKRKEKEGREFELENLKKMDGGNDDLRINNAASDPI
LRRSQARGSSEEKEADERNGSRKMSSASKSPHSMDHSPFNRSSLSRSVSKSFSNSRSYSD
ERHRSRSLSGSPQPRGRFISPERRYRSPRRRSVSPRHWPSPRKPRSPLRSRLYHSRHRSP
SYSRRRSPSPVRRRLPSPSRRRSPSPVRRRSPPVRRRSPSPVRRRSRRSPSLRHRSPLGV
RRRLPTPSRRRSPPSRWNSPSPVRRRSPSPLRRRSPPPRSPRHRRRSPLGSPRMRYRSRS
PYRSRSPAYRSHRSLSRDRNARTNGVESRSTRNAHVSQRARGKMSPVHHAPQREVERLGQ
AQRGVDTESRQPPISLRSPQRDPNVRSNADQKKPALAHTPEFSRSPSDSSPHMGKLSPHE
DRVHSSSESPPRQEKERLSRHGSASPVRRPRKQTVRHDSSETSWAEEISHAREDEKYRNN
FSDRHSPRSGNWKHSSVKDFRQEEYRPERVGGHQSAEARGHPDNTELRKKYRDKKSSKAS
MGSGRSESPIQKESPILGGIEYGPGRPGFVPDDVQAGQQLANKHGRDSPSLSERVQKSSS
REGNKADEGKHSHSSKAEDRGRHDRTEEVQKSLKNVDRKNRPGDSDSDSAEKEKFRSDYV
EKRKHKRSCRLEMASDDNAYDDSEIDERKEAKRRRKEEKRLRRDERRRRREERHRRREER
RASKLKAKSGDTVTPPSDFEKLRNDADDSEREGDASKDSNPSDTEEKQSEQKKLEIELRK
KALESLRAKKGINH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgggttcttccgaggcacctcggccgatcaagacactcgcttctcaaataaa
caggcgaagctgttgaaatcccagaagttcgccccggaattggaacatctggtggacatg
actaaggtgaagatagacacgatcaaaccctggatagctaagagggtaacagagcttctg
ggattcgaggacgaagttctgattaatttcatttacggtctgttggatagaaaggaggtg
aacgggaaggaggttcaaatccagctcactggatttatggagaaaaacactggaaaattc
atgaaagaactttggaccctcctcttgagtgctcagaataatgccagtggtatccctcaa
cagatattggatgccacagatgaggaacttaggaagaagaaggcggaagctgatcgaatt
acccatgaaattcagaagaggaaagagaaagaaggaagagagttcgagctagagaacctg
aagaagatggacggcggtaatgatgacttgaggatcaataatgctgcatctgatccaatc
ttgaggcgttcacaggccagaggctccagtgaagagaaagaagctgatgagaggaatggc
tcaaggaagatgagcagcgcatccaaatctccacattcaatggaccattccccttttaat
cgcagctctctttccaggtcagtcagcaagtcattttccaattcgaggagttattcagat
gaaaggcacagatcaaggagcctatccggttctcctcaaccacgagggcgctttatttct
cctgaaaggcggtatcgatctcctaggaggcgttctgtttctcctcgtcactggccttca
ccgcgaaaacctcgttctcctttaaggagcagattatatcattctagacataggtcacca
tcatattcgcggcgtagatctccttctcctgtgcggcgtagactgccctctccatcaaga
cgtagatctccttcccctgtgcggcgtagatctcctcctgtgcggcgaagatctccttct
cctgtgaggcgtcgatcacgtagatctccatcacttcgacataggtctccacttggtgtc
cgcaggaggttgccaactccctcccggcgtcggtctccaccttctaggtggaattcccca
tcaccagttcggcgcaggtcaccctctccattgaggaggagatctcctcctcctaggtcc
ccaagacacaggaggaggtcaccattgggatcaccaagaatgagatataggagtcgtagt
ccatatagaagccgcagtcctgcatatagaagtcatagaagcttgagtagggaccgcaat
gctagaactaatggtgtggaatccagaagtacacgtaacgctcatgtctctcaaagggcc
cgtgggaaaatgtctcctgttcatcatgctccacagagagaggttgagcgactaggtcag
gcacaaaggggagtggacacagagtctcgccagccaccaatttcattgaggtcaccacaa
cgggatcctaatgtccgtagcaatgccgatcagaaaaagcctgctttggctcatacacca
gaattttctcgaagtccatcagattcttcaccacacatggggaaattgagccctcatgag
gatagggtccacagctcatctgagagtcctccgaggcaagagaaagaacggttgagtcgt
catggcagtgcaagtcctgtgaggcggccaaggaaacagacagttcgtcatgacagctca
gaaacaagttgggcggaagagatcagtcatgcgagggaggatgagaaatataggaataat
ttttcagatagacattcacccagatctggcaattggaaacattcttctgtgaaggatttt
cgacaggaagagtaccgccctgaaagagtaggtggtcatcagtctgctgaagctaggggt
catccagataacacagaattgagaaagaaataccgggacaaaaagagttcgaaagcttca
atggggtctggtcgttctgaaagtcctatacaaaaagaatctcctattttgggtggtatt
gaatatgggcctgggaggccgggctttgtaccagatgatgttcaggctggacaacaacta
gctaacaaacatggaagagattctccttcattaagtgaaagagtacagaaatcatcctcc
agagaaggtaataaagcagatgagggaaagcattcccattcaagcaaggctgaagacagg
ggccggcatgacaggacagaagaagtacagaaatcgctgaagaatgttgacaggaagaat
cgtcctggtgactctgattctgattcggctgaaaaagagaaatttagatctgattacgtg
gaaaagagaaagcataagaggtcatgtaggcttgaaatggcttcagatgataatgcatat
gatgattctgaaattgatgagaggaaggaggccaagagaagaaggaaggaagaaaagaga
ttgcggagagatgagaggcggcgacggcgtgaagaacgacaccgtagaagggaagaacgc
cgtgcaagcaagctaaaagccaagtcaggggacacagtcactccaccctcagattttgaa
aaacttcgaaatgatgctgatgattcagaacgtgaaggtgatgctagcaaagattcaaat
ccaagtgacactgaagagaaacagtcagagcagaaaaagcttgaaattgagctccgaaag
aaggctcttgaatcgctaagagcaaagaagggcatcaatcactaa
DBGET
integrated database retrieval system
