Telopea speciosissima (New South Wales waratah): 122651537
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Entry
122651537 CDS
T07910
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122651537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122651537
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122651537
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
U-box type E3
122651537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
MLKL_N
Neurochondrin
Arm_2
HEAT_EZ
ARM_LIN_C
zf-Nse
MCAfunc
zf-RING_UBOX
KAP
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122651537
NCBI-ProteinID:
XP_043700886
LinkDB
All DBs
Position
2:2638621..2673906
Genome browser
AA seq
673 aa
AA seq
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MEEEKGVVIQKLIDMVNEISTISDYRCAIKKQFCNLARRLKLLLPMFEELRDSKDPFPED
TLIPLTSLKEALESTKELLRSGSQGSKIHLVLEREQIMNQFQEVTAWLEQALSGISYDKL
EISDEVREQVELVLAQFRRAKGRVDAPDVELYEDLLSVYIRSSDADVDPAVLRRLAEKLQ
LMGINDLKQESLALHEMVVSNAGDPGESIEKMSMLLKKIKDFVLTENPDMGAPESLNCPS
SGNTQPLADGNPKSLVIPDDFRCPISLELMKDPVIVSTGQTYERSFIEKWLEAGHLTCPK
TQQNLSSASLTPNYVLRSLIAQWCEANGIEPPKRPSNSRPSKTTSVCSPAECAKIDILLR
KLTSGNLEDRRSAAGELRLLAKRNADNRVCIAEAGAIPLLVGLLSTSDPRTQEHAVTALL
NLSICEDNKGRIVSSGAVPAIVHVLRKGSMEARENAAATLFSLSVVDENKVTIGSSGAIP
ALVTLLNEGSQRGKKDAATALFNLCIYQGNKGRAVRAGVVPTLMRLLTEPGGGMVDEALA
ILAILASHPEGKAAIGAAEAVPVLVEVIGSGSPRNRENAAAVLVHLCSGDQQYLAKAQEV
GVMGPLTDLAQNGTERGKRKAAQLLERMSRFFEQQEAQAQAQAQAQGQLEAEVQGQAPNQ
QTQVPPTASGVDR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaagggagtggtgatccagaagctgattgacatggttaatgagatctct
acaatctccgactacagatgtgccatcaagaagcagttttgcaacctagctaggcgattg
aagctcttattgcctatgttcgaagagctcagggacagcaaagacccctttcctgaggac
actctcattcccctcacgtctttgaaggaggccctggaatcaactaaggagctcctccga
tcgggtagtcaagggagcaaaattcatttggtcctggaaagggagcaaataatgaaccaa
ttccaggaagtgacagcttggctggagcaagctctgagcggaatttcctatgacaaactc
gagatatcagatgaagttagggagcaggttgagctagtgctagctcagtttagaagagcc
aaaggacgggttgatgcacctgatgttgagctttatgaagatttattatctgtttacatc
agaagcagtgatgcagacgttgatccggctgtgcttaggagattagctgaaaagttacag
ttgatgggcataaatgacctcaaacaagagtctctggctttgcatgagatggttgtctcc
aatgctggagatcctggggagagcatagaaaagatgtcgatgctactaaagaagattaag
gattttgtgctgactgaaaaccctgacatgggagctcctgaaagtttaaattgtccatca
agtggcaatacacaaccattggctgatgggaatccaaaatctcttgtcataccagatgat
ttccgctgtccgatatccctggagttgatgaaagatccagttattgtatccacaggacag
acctatgagcgatcattcattgagaaatggcttgaagcgggtcatctcacgtgtccaaag
acacaacagaacctttctagtgcttccttgacacccaactacgtcttgcgtagcctcata
gctcagtggtgcgaggctaatgggatagaaccacctaaacgacctagcaattcacgcccc
agtaagaccacctctgtctgctcacctgctgaatgtgcgaagattgatattctccttcgc
aaactgacttctggcaaccttgaggaccggagatcagctgcaggtgagctacgccttctt
gccaagcgcaatgctgacaaccgtgtgtgcattgctgaggctggtgccattcccctcctt
gttggcctcctctcgacttctgaccctcgcactcaggagcatgctgtcactgcccttctg
aacctttccatttgtgaggataacaaagggcgcatcgtatcttctggggctgtccctgcc
attgtacatgtgctccggaaaggcagcatggaggcacgggaaaatgcagcagccacacta
ttcagcctttctgtggtggatgaaaacaaggtgacaattggttcatcaggggcaatacca
gcacttgtgacgctgcttaatgaaggtagccaacggggaaagaaggatgcagcaacagcc
ctattcaatctgtgcatataccaagggaacaagggaagggcagtgcgggctggagtagtg
ccaacactgatgagactgctgaccgaacctggaggtggaatggtagatgaagcattggcc
atactagctatactggcaagccatcccgaggggaaggcagcaataggagctgcagaagct
gtgcctgtcttggttgaggtgatagggagtgggtcaccgaggaacagggagaatgcagca
gcagtgttagtgcacttgtgctcaggggaccaacagtatctagcaaaggctcaggaggtt
ggtgtgatgggtcccttaacagatttggcacagaatggaacagagagaggcaagcgaaag
gctgcacaattgcttgagcgtatgagcagattttttgagcagcaggaggctcaggcacag
gcacaggcacaggcacagggtcagctggaagccgaggtccaaggtcaggctcctaaccaa
caaacacaggtgccacctacagcaagtggtgttgatagatga
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