Telopea speciosissima (New South Wales waratah): 122651541
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Entry
122651541 CDS
T07910
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122651541
Membrane trafficking [BR:
tss04131
]
Protein recycling
Others
EARP complex
122651541
Endosome - Golgi transport
Tethering complex
GARP complex
122651541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
COG7
RINT1_TIP1
Vps54_N
MUN
COG5_N
MPH2
DUF401
Motif
Other DBs
NCBI-GeneID:
122651541
NCBI-ProteinID:
XP_043700892
LinkDB
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Position
2:78497584..78537232
Genome browser
AA seq
823 aa
AA seq
DB search
MRAMDKSSALEYINQMFPTEASLSGVEPLMQKIHSEIRHVDAGILAAVRQQSNSGTKAKE
DLAAATSAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKQILKSHV
FSDFSSLGTGKETEETNLLQQLSDACLVVDALEPSVREELVKIFCNRELTSYRQIFEGAE
LAKLDKSERRYAWIKRRLRTNEEIWKIFPSSWQVAYLLCIQFCKLTRAQLEEILDTLKEK
PDVGTLLMALQRTLEFEEELAEKFGGGTRNKETEIEEIDKAESNSQTVLDIRRKYEKKLA
AHHGSGTDETDGPKDFSVPGAGFNFRGIISSCFEPHLTVYVELEERTLMESLEKLVQEES
WDIEEGQTNILSSSMQVFLVIRKSLKRCSAMTKSQTLFNLFKVFQRILKAYATKLYGRLP
KGGTGIVAAATGTDGQIKTSDRDERMICYIVNTAEYCHKTSGELAENVSKIIDSQYADKV
DMSEVQDEFSAVITKALMTLVHGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNGINSIL
TSSIPVLGSLLSPVYFQFFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTIL
LDIPALGKQNSGAAGYSKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPLEFQRI
LELKGVKKADQQSILDDFNKHGSGITQPSVAQSVVPAVPPAPAAPVVANPASVGAIVVSR
EDVLTRAAALGRGAATTGFRRFLALTEAAKDRKDGPFRKLFSP
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatggataagtccagcgctctcgagtacatcaaccagatgttccccacagag
gcatccttgtctggtgtggagccactcatgcaaaagatacacagtgagattcgccatgtg
gacgcgggaatattggcagctgttcggcaacagagtaattctggaactaaagctaaggaa
gatcttgctgcggctacaagtgctgttgaggaacttatgtacaagatccgagaaataaaa
acaaaggcagagcaaagtgagacaatggttcaggaaatttgtcgtgacattaaaaagctg
gattttgcaaagaagcatataacaactacaatcactgctcttcatcgtcttaccatgcta
gtctcagccgttgagcagcttcaggtaatggcttcaaaacgacaatataaggaggctgct
gcgcagttggaggctgtaaatcaattatgcagtcattttgaagcatacagggatgttcca
aagattactgaacttagagaaaaattcaagaatatcaaacaaatactcaagtctcatgta
ttttctgatttctcaagcttaggtacagggaaagagacagaagaaacgaatttgctgcag
cagttatcagatgcttgtttagttgttgatgctttggagccatctgtgcgggaagaattg
gtaaaaatcttttgcaacagggaactaacttcatatcggcagatttttgaaggagcagag
cttgcaaaattggataaatctgaacgtagatatgcatggatcaagcgccgtcttcgtacg
aatgaggagatctggaagatctttccttcttcatggcaggttgcatatttgctctgtatt
caattctgtaaattgacaagggcacaacttgaggaaatccttgataccctcaaagaaaag
ccagatgttgggacgttgctgatggcattacaaaggactcttgaatttgaggaagaatta
gctgagaagtttggtggaggcacccgcaataaggaaactgagattgaagaaatagataaa
gcagagagtaacagtcaaactgtattagatatccgaaggaagtatgaaaaaaagcttgct
gctcaccatggaagtggaactgatgaaacggatgggcctaaagatttttcagtgccagga
gctgggttcaactttcggggcattatatcatcttgctttgaacctcacctgacagtatat
gtagaactagaggagagaactctaatggagagtttggaaaaacttgtccaggaggaatcc
tgggatattgaagaaggtcagacaaatattttatcaagcagcatgcaggtatttttggta
atcaggaaaagtttaaagagatgcagtgctatgacaaagagccagacgttatttaattta
ttcaaggtatttcaacgaattcttaaagcatatgctacaaagctttatgggcggttaccc
aaaggtggtacagggattgttgcagctgccactggcacagatggacagatcaagacatct
gacagggacgagaggatgatctgctacattgtgaacacagcagaatattgccataaaacg
tctggtgagctagcagaaaatgtatcaaaaatcattgattctcaatatgctgacaaggtg
gatatgtcagaagtgcaggatgaattctctgcagtaattacaaaagcattaatgacatta
gtgcatggtttagaaaccaaatttgatgctgaaatggctgcaatgacacgtgttccttgg
ggcacacttgaaagtgttggtgaccaatcagagtatgtcaatggcataaattcgatcctc
acaagcagtattcctgtgcttggcagcctattatctcctgtttacttccaattttttctt
gataagctggctgcatctcttggtcctcgcttctacctcaacatttacaaatgcaagcac
atttctgaaactggagcccaacagatgcttttggatacgcaggctgtaaagacaatcctc
cttgatattcctgctcttggaaaacagaattcaggtgctgctggctactcaaaatttgtc
agccgtgagatgagcaaagctgaggcacttttgaaggttatattatctccaattgattct
gtggcggatacataccgagctcttcttcctgagggaacacctttggagtttcagcggatt
cttgagcttaagggtgtgaagaaagcagaccaacagagtattctggatgattttaacaag
catgggtctgggattacacaaccttctgtggctcagtcagttgtgccagctgtcccacct
gccccagctgctcctgttgtggccaatcctgcttcagttggagcaatagtggtgtcccga
gaagatgtgctcacccgagcagctgcactaggacggggtgctgccacaactggtttcaga
aggttccttgctcttacagaggcagcaaaagataggaaggatggacctttccggaagctc
ttcagcccataa
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