KEGG   Telopea speciosissima (New South Wales waratah): 122651545
Entry
122651545         CDS       T07910                                 
Name
(RefSeq) sm-like protein LSM7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03018  RNA degradation
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122651545
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122651545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122651545
   03041 Spliceosome [BR:tss03041]
    122651545
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122651545
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     122651545
Spliceosome [BR:tss03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    122651545
SSDB
Motif
Pfam: LSM Hfq DUF150_C
Other DBs
NCBI-GeneID: 122651545
NCBI-ProteinID: XP_043700896
LinkDB
Position
2:67058808..67086443
AA seq 155 aa
MISLPQNGGISFLLLFLLIESLLAGVGVHTAVAVFDHLQFTNFHLKDRKALRENKIMSGR
KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEYLRDPDDPLKTTDQH
RRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgatttctttgccacagaatggaggcatttcgtttctattattgtttttattgattgag
tctctgcttgcaggtgttggtgttcacactgcggtagcagtatttgatcacctacagttt
actaatttccacctgaaagatcgaaaggcactcagagaaaataaaatcatgtcaggccgc
aaagaaacagtacttgatctggcaaaatttgttgacaagggcgtccaagtgaagctaact
ggtggaagacaagtgacagggactttgaagggatatgaccagttactaaacctcgtgctg
gatgaagctatagagtacctaagagatccagatgatccactgaagactactgatcagcac
cggcgtcttggactaatagtttgtagggggactgcagtgatgctcgtatccccaactgat
ggcacagatgagattgccaacccttttatccagccagacggggcttag

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