Telopea speciosissima (New South Wales waratah): 122652338
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Entry
122652338 CDS
T07910
Name
(RefSeq) serine/threonine-protein kinase VPS15-like
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122652338
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tss01001
]
122652338
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122652338
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122652338
Protein kinases [BR:
tss01001
]
Serine/threonine kinases: Other
VPS15 family
122652338
Membrane trafficking [BR:
tss04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122652338
Autophagy
Autophagosome formation proteins
PI3K complex
122652338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
PK_Tyr_Ser-Thr
HEAT
HEAT_EZ
NBCH_WD40
Cohesin_HEAT
TCAD9
APH
Motif
Other DBs
NCBI-GeneID:
122652338
NCBI-ProteinID:
XP_043701982
LinkDB
All DBs
Position
2:complement(77268392..77284139)
Genome browser
AA seq
1502 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFLKSIQCKHDEGLVLVKVYFKRG
DSIDLKEYERRLFQIKETFRSIQHSHVWPFQYWLETDKAAYLLRQYFFNNIHDRLSTRPF
LSLIEKKWFAFQLLYAVKQSHENGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGETQVAPDAPLRPSMDIFSVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPNQLLEKIPDSGIRKMILHMIQLDPESRLSADSYLQNYAAVVFP
NYFSPFLHNFFSCLIPLDSDTRIAVTQSAFHEIHRQMMKNKESEEIGSVSCKSSNTTTDG
TPRKIGLNSSKEFLKKREPDKGLLNDQLQLLGDINALLRDVEPSNHCCNSELTFENSPSV
SLGKSDPRNSATPQNPKNGQKESPGELLQTACNGFRGRDHSLFRKIIKSDLNALMSQYDN
QLDTFGMPFFTITQHNMSCEGMVLIASLLCSCIRSVRLPQLRRGAVLLLKSSSLYIDDED
RLQRVIPHVITMLSDPSAIVRCAALETVCCILPLVQEFPPSDAKIFPEYILPMLSMLPDD
SEESVRICYASNISKVALTAYRFLIQSLSLSKAGVLDKLSTTPKSSVPSSGQLQSEKTNA
QLAQLRVLIAEVVQELVMGPKQTPNIRRALLYDIGNLCCFFGQRQSNDFLLPILPAFLND
RDEQLRAVFYGQIVFVCFFVGQRSVEEYLLPYIEQALSDAVQAVIVNALECLSLLCNNSF
LRKRILLEMIERALPLLCYPSQWVRRSVVTFIAASSECLGAVDSYVYLAPIIRPFLQRQP
ASLGSEKPLLSCLKPPVSRQVFYQVLENARSSDMLDRQRKIWYNSSAQSKQWETVENKRG
MGELNPIKSWSSKPPDLQGHKPASSTIQQVGLSDGDDGDAKFRATGSFMPNASSTMDIRD
PLSSEKMQFSGFISPHGSGGSSSVGDGSSEGIPLYSYNMDKRATGVAPAGSDSASQWNSL
GIGSSSMPWVDPLNKSFSLANSSVAPKLVSGSLSISNGSKQFYKVLREAEGRENDQTVYI
TNKFQDMGVSGLLKGSSINVEDVPSQSDATGLTSFARASSLPDTGWRPRGVLVAHLQEHR
SAVNDITISSDHSFFVSASDDSTVKVWDTRKLEKDISFRSRLTYPLDGSRALCATMLRGS
AQVVVGACDGMIHMFSVDHISRGLGSVVEKYSGIADIKKREVGEGAILSLLNYTMEGCPS
QTIIYSTQGCGIHLWDTRTNSMSWTLKAVPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD
LRFLLPVNTWQYSLVCPVEKMCLLVPPPNAPRSTAGRPLVYVAAGCNEVGLWNAENGSCH
QVLRLSNNESDAESSGLPWALARPSSKPSSKQDMNRNVNPKYRVDELNEPPARLPGIRSM
LPLPGGDLLTGGTDLKIRRWDHCSPDRSYCVCGPSLKGIGNDEFYETRSSFGVQIVQVCE
KN
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacaagattgcacgcacaacacaggtttcagcatcagagtactaccttcatgat
cttccatcatcatataaccttgtcctcaaggaggttctgggtcgaggtaggttccttaaa
tcgattcagtgcaagcacgacgagggacttgtcctcgtcaaggtctacttcaagcgtgga
gactccattgatctcaaagaatatgagcgtcgcttatttcaaatcaaagagacctttcgt
tctattcagcactctcatgtttggccattccagtattggcttgaaacggataaagcggct
tatttattgaggcaatatttcttcaataacattcatgatcggttaagtactcggcccttc
cttagtttgattgagaagaagtggttcgcttttcagttactatatgctgtgaagcaaagc
catgagaatggtgtttgtcatggtgatatcaagtgtgagaatgttctggttacttcttgg
aattggctttaccttgctgactttgcttcattcaagcccacttacatacctgatgatgac
ccctccgatttctctttcttctttgatactggagggagaaggcggtgttatcttgctcca
gagagattttatgagcatggaggtgagacacaagttgcaccagatgcacctttaaggcca
tctatggacatcttctctgtagggtgtgtgattgcggagctttttcttgagggacagccg
ttgtttgaattatctcagctacttgcttataggagagggcaatatgatccaaaccagctt
cttgaaaagatcccggattctggaatccgcaagatgattcttcatatgattcagttggac
ccagagtcacggctttctgctgatagctacttgcagaattatgctgctgttgtgttccca
aactacttctcaccatttctccataatttcttttcctgcttgattccccttgattctgat
accaggattgcagtgacacagagtgccttccatgagatacataggcaaatgatgaagaac
aaggaaagtgaggagattggttctgtatcatgcaagtcttccaataccacaactgatggg
actcctcggaagataggcttgaattcatcaaaggagttcttgaagaagagagagccagat
aaaggcctgttgaatgatcagcttcagcttcttggtgatatcaatgcactccttagggat
gtagaaccgagtaatcattgctgtaattctgagctgacatttgaaaattcccctagcgtt
tctttgggaaagtctgatccaagaaattctgcaactcctcaaaacccaaagaacggccag
aaggaatctccaggggagctcttgcaaactgcttgtaatgggtttaggggcagggatcac
tcccttttcaggaagattataaagagcgacttgaatgcattgatgtcccaatatgacaac
caattggatacttttgggatgcctttctttacaataacccaacataatatgagctgtgaa
ggaatggtgttgattgcttcactgctatgttcctgcatacgtagtgtcaggttgccacag
ttgagaaggggagctgtgctactactgaagtcatcttccttatatattgacgatgaagac
cgcttgcagcgtgtgattccacatgttattacaatgctttctgatccatctgcaattgtg
cgttgtgccgctctggaaactgtgtgttgcattctgccattagtccaagaattccctcct
agtgatgcaaagatttttcccgaatacattcttccaatgctatctatgcttccagatgat
tcagaggaaagtgtgcggatttgttacgccagcaatatctccaaggtcgcgctaactgct
tatcgttttctaattcaatcattaagcttgagcaaagcaggggttcttgataaactcagt
acaaccccaaaatcatcagttccatcatctggacagctgcagagtgagaaaactaatgca
cagcttgctcagttgagggtgttaatagctgaggtggttcaagaactggttatgggccca
aagcaaactccaaatatcaggagagcactcctatatgacattggtaacctttgttgcttt
tttggtcagcggcagagtaatgattttctgttaccaatcctcccagcttttctaaatgat
cgagatgaacagctgagggcagtattctacggccaaattgtgtttgtctgcttctttgtg
ggtcaaagaagtgtcgaggaatatcttttaccttatattgagcaagccttaagtgatgcc
gtgcaggctgttattgttaatgcattggaatgcttatccttgctgtgcaataatagtttc
ttgaggaagaggatattgcttgaaatgattgaacgtgctttgccattactatgctatcct
agtcagtgggtaaggagatcggttgtcactttcattgcagctagcagtgagtgtttgggt
gcagtggactcctatgtttatctagctccaattatacgccctttcctccaaagacagccc
gcatctctaggttcagaaaagcctcttctttcatgtctcaagcctcccgtttcaagacag
gttttttaccaagtcttagaaaatgccaggagctcggacatgctagacagacagagaaaa
atatggtacaattcatctgcacagtcaaagcaatgggaaacagtagagaacaagagggga
atgggggagttaaatcccattaagagctggtcaagcaagccacctgatttgcagggtcat
aaacctgccagcagtaccatacagcaagttgggctatctgatggtgatgatggtgatgct
aaatttagggcaacgggaagcttcatgccaaatgcttcaagcacaatggatattcgtgat
cctctgtcctcagaaaagatgcagttttctggcttcatttctccacatggtagtggtggg
agcagttcagttggtgatggatcgtctgaaggaatacctttgtactcctataacatggac
aaacgagcaactggagttgcacctgctggatctgattctgcatcacagtggaacagcctt
ggaattggttcatcatcaatgccttgggtagacccacttaataaatcctttagcttggct
aattcatctgtggcacctaagcttgtttcaggctcccttagcattagtaatggctcgaag
cagttctacaaagtgttacgggaagctgaaggcagagaaaatgatcaaactgtctacatc
accaacaagtttcaagacatgggagtatctggtttgttaaaaggaagttctattaatgtg
gaggatgtcccttcacaatctgatgcaacaggattgacatcttttgcccgagcatcatca
cttccagacactggttggaggcctcgtggggtattggtggcacatctccaggaacaccgt
tctgcagtcaatgacattaccatttcatctgatcacagcttttttgtaagtgcatctgat
gattctactgtgaaagtatgggatacaaggaaactggaaaaggacatctctttcaggtca
cggctgacctaccctttagatggaagccgggcactatgcgctacaatgctacgtgggtct
gcgcaagttgttgttggagcatgtgatggaatgatacatatgttctctgttgatcacatt
tccagagggttaggaagtgttgttgagaagtattcaggtatcgccgacatcaaaaagagg
gaggttggggaaggagccattctcagcctgttgaactatacaatggaaggctgtcccagt
cagacaattatatacagtacccagggctgtgggatccatctctgggatacaagaacaaat
tcaatgtcatggacattgaaagcagttcctgaggagggctatgtgtcttctctggtgaca
ggtccttgtggaaactggtttgtatcagggtcttcgaggggtgtgcttactctttgggat
ctgaggttccttttgcctgttaacacatggcaatattctctggtatgccccgtagagaaa
atgtgtctgctcgtaccacctccaaatgctcccaggtctactgcaggaagacccttggta
tatgtagctgcaggttgtaatgaagttggcctctggaatgcagagaatgggagctgccac
caggtactgcgactgtcaaacaatgaatctgatgctgaaagctctggcctgccttgggcc
ttagccaggccttccagcaagcccagttctaaacaagatatgaatcgaaatgtcaatcct
aagtaccgagttgatgagttgaatgaacccccagctcgtcttcccggtatccgttcaatg
ctccccttacctggaggagatctattaactgggggaactgacttgaagattcgtcggtgg
gaccactgcagtcctgatcgcagttattgtgtttgtgggccgtcactgaagggaatagga
aatgatgagttttatgaaaccagatctagttttggggtgcaaattgtgcaggtatgtgaa
aagaattag
DBGET
integrated database retrieval system
