Telopea speciosissima (New South Wales waratah): 122652394
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Entry
122652394 CDS
T07910
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122652394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122652394
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
122652394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
122652394
NCBI-ProteinID:
XP_043702051
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Position
2:2707401..2761177
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AA seq
691 aa
AA seq
DB search
MARNKEGLLLLLDVSPSMHNLLPEIEKVCSMLIQKKLIYGKSDEVGVVLFGTEDTDNELT
KEVGGYEHVVVLRHIKVVDGDMIEALQKLPRGTAPGDYLDAIVVGMDMMIKKYGPTNKGK
KRLCLLMNPLYCIKEPYEGTKEDQIDTIATQMNSHGMKLDCVIVRGKLTGDADTRILDEN
DHLLNRFSKRTCGKMVYVESPTSLLGALRTRNISPVTIFRGDLELSPRMRIKVWVYKKTS
EEKFPTLKKYSDKAPPTDRFATHEVKVDYEYKRVEDTNKIVPPEQRIKGYRYGPQVVPIS
SAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNIFIAEPGNTRAIQAVSAIARAMKE
MNKVAIVRCVWRQGQGNVVVGVLTPNLSKQDNIPDSFYFNVLPFAEDVREFQFPSFRSFP
SSWQPNEQQQEAADNLVKMLDLAPPGKEEALHTDFTPNPVLERFYRFLELKSKQPGAAVP
PLDNTLKKITEPDSELLSQNKSAVDEFCKQFELKENPKIKKSSKRLWREKTSRSNEEKNV
GDTGTDAQSGNSSRSESSIKVERIGDLTPVQDFEAMMSRRDSTEWVIKAISNMKGFIFNL
LENSYEQDNFEKALECLTSLRKACILEQEPEQFNNFLHELYMFCQKEDLSSFCELLASKQ
IKLITKAEAIDSNVTEDEAKNFLVKREHVLE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaaacaaggaaggattgcttttgctgctcgatgtcagtccatcaatgcacaat
cttctcccggagattgaaaaagtttgctccatgcttatacaaaagaagctaatttatggc
aaaagtgatgaagttggagttgttctgtttggaactgaagatactgataatgagctgaca
aaggaagtgggtggctatgaacatgtggtggtgctacgacacatcaaagttgttgatgga
gatatgattgaagctttacagaagcttcccaggggaactgcgcctggtgattatctggat
gcaattgtggtgggaatggatatgatgataaagaaatatggacctacaaacaagggaaag
aaacgcctttgtcttttgatgaatccattgtactgcattaaagagccgtacgagggaaca
aaagaagatcagattgataccattgctacacaaatgaattctcatggcatgaaactggat
tgtgtaatcgtgagaggcaaattaactggtgatgcagatacaaggatactagatgagaat
gatcatttactgaatcgattttcaaagaggacatgtggaaaaatggtatatgttgaaagt
cctacatccctgttaggtgctctcagaactcgaaatatatctcctgttacaatattcagg
ggtgaccttgaattaagcccaagaatgagaatcaaggtgtgggtttacaagaaaacctct
gaggagaagtttcccacactaaagaagtattctgataaagcacctccaactgatagattt
gctactcatgaggttaaggtagattatgaatataaaagagttgaagatacgaataaaatt
gtacccccagaacaaaggataaaaggttatcgctatggacctcaagtagtccctatttca
tctgctgaatgggatgcagtcaaattcaagccagaaaaaagtgtgaagcttctgggattt
acaaacgcttctaacataatgcggcactattatatgaaagatgtgaacatcttcattgcc
gaacccggaaacacaagggccattcaagcagtttctgcaatagcaagagcaatgaaggag
atgaataaggtggcgattgtacggtgcgtatggagacaagggcagggcaatgttgttgtt
ggcgttttgacaccaaatttgtccaagcaggataacatcccggattcattttatttcaat
gtacttccttttgctgaggatgttcgagagtttcagtttccctcctttaggagtttccct
tcatcgtggcagccgaatgaacaacagcaagaggcagcagacaatttggtcaagatgctt
gaccttgcaccaccaggcaaagaagaagctctgcatactgattttacaccgaatcctgtc
ttggagcgcttctatcgattccttgaattaaaatcaaagcagccaggtgcagcagttcct
ccacttgacaacactcttaaaaaaataactgaacctgattcagaacttctttctcaaaac
aagtctgctgtagatgaattttgtaagcagtttgagcttaaggaaaatccgaagataaag
aagtcatctaaacgattgtggagagaaaaaacatcaagatcaaatgaggaaaagaatgtg
ggagatactggtactgatgctcaaagtggcaattcgagtaggagtgaatcctcaataaag
gttgagaggattggagatttgactcctgtccaagattttgaagccatgatgtctcgtaga
gatagcacagagtgggtcattaaggcaattagtaacatgaaaggttttatttttaacttg
ctggagaactcctatgaacaggacaactttgaaaaggcattggaatgtttaacatctctt
cgaaaagcttgcatccttgagcaggaaccggaacaattcaacaactttcttcacgaactt
tatatgttctgccagaaggaagatctaagcagcttctgcgagttacttgcatcgaaacag
atcaagttgattaccaaggcggaagccatagacagtaatgtgacagaagatgaggccaaa
aatttccttgttaaaagggagcacgttcttgaataa
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