Telopea speciosissima (New South Wales waratah): 122652980
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Entry
122652980 CDS
T07910
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122652980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tss04147
]
122652980
Membrane trafficking [BR:
tss04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122652980
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122652980
Exosomal proteins of bladder cancer cells
122652980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD_LRWD1
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
122652980
NCBI-ProteinID:
XP_043702816
LinkDB
All DBs
Position
2:complement(69314944..69322973)
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLTFHNKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
HTQPLFVSGGDDYMIRVWNYKTRRCLFTLLGHLDYIRTVQFHNEYPWIVSASDDQTVRIW
NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTIRVWDIGALRKKTVSPTDDILR
LSEMNADLFGGVDVVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQIKLWRMNDTKAWE
VDTLRGHTNNVSCVMFLAKQDIIASNSEDKSVRVWDVTKRTGIQTFRREHDRFWVLASHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDTLYYVRDRFLRLYEFSTQKDIQVIPIRRPG
SISLNQAPRTLSYSPTENAVLICSDVDGGSYELYILPKDGGIGRVDLVQESMRGIGTSAV
FVARNRIAVLDKSNNMALVKNLKNEIVKKSSLPVVADAIFYAGTGNLLCRAEDRVVIFDL
QQRIVLGELHTPFIRYIAWSNDMECVALLSKHAIVIATKKLMHQCTVHETIRIKSGAWDD
NGVFIYTTLNHMKYCLPSGDTGIIRTLDVPLYITKVSQNIVHCLDRDGKHRSITIDATEY
VFKLSLVKKRFDHVMSMIKSSRLCGQATVAYLQQKGFPGIALHLVKDERTQFNLALESGN
IQIAVASAKEIDEKEHWYKLGVEALRQGNASIVEYAYQRTKNFERLSFLYLVTGNLEKLS
KMLRIAEVKNDVMGQFHNALYLGDIQERAKILEHAGHLPLAYVTAKVHGLKEIADKLASE
LGDTVPSVPEGKVPSLLIPPAPIVYGGDWPLLRVMKGMFDGELDNMGKAGQEEEDESVDG
DWVEDLDIADVDDMLNGDIGVVIDNDEINEGNDAEGGWDLEDLDLPAEVDSPSTAISGRA
AVFIAPTPGTHVSQLWIQRSSLAGEHAAAGNFDTAMRLLNRQLGVKNFAPLKPMLMDLYL
GSHSYVRGFDSVPVITKAIERGWNESAGPNMRYPPALVFELSQLDDKLKTAYKATTEGKF
VEALRVFLNILHTIPLIVVESRREVDEVKELIVIAKEYVLGLKMEVKRKEIKDDVVRQQE
LAAYFTHCNLQMIHLRLALNSAMGICYKAGSLITAGNFARRYLETNPSNENQVRRARQVL
QACDRNMKDATLLNYDFRNPFVVCGGTYVPIYHGQKYVSCSYCGSHFVPTFEGQLCAVCD
LSIVGSDASGLLCSLSQGR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagttcgagacgaagagtaacagggttaagggcttgacctttcacaataag
agaccatggatcttggccagccttcatagcggagtaatccagctctgggattacaggatg
ggaactctcattgacagattcgatgagcacgacggtccagttcgcggtgtccatttccat
catactcagccgctcttcgtgtctggaggagatgattacatgattagggtctggaattat
aagacacgtcgctgtttatttactcttcttgggcaccttgattacatccgcactgtccaa
ttccacaatgagtatccctggattgttagtgcaagtgatgatcaaacagttagaatatgg
aattggcaatcgcgcacctgtgtttctgttttaactggacataatcattatgttatgtgt
gcctctttccatccaaaggaggatttggttgtctcagcatccttggatcaaacaattcgt
gtttgggatataggggccctgaggaagaagactgtgtctccaactgatgacattctgcgt
cttagtgaaatgaacgcagatttatttgggggagtcgatgttgttgttaaatatgtctta
gaaggtcatgatcgcggagttaactgggcttcattccaccccagcctaccactgattgta
tctggagcagacgatcgtcaaataaaattgtggcgaatgaatgataccaaggcttgggaa
gtggacacattgcgaggccatacaaataatgtgtcttgtgttatgttccttgcaaagcag
gacattattgcatcaaactcagaggataaaagtgttcgtgtctgggatgtcactaaacgg
accggtatccagacattccgtagagaacatgatcggttttgggttcttgcatctcatcca
gaaatgaaccttttagcagctggtcatgatagtggtatgattgtctttaagttggagaga
gaacgacctgctttttctgtaagtggtgatacattatactatgtcagagatcgtttcttg
cgtctgtatgagttctcaactcaaaaggacatccaagtaattcccatacgacgacctggt
tccatcagcttgaatcaggctccgagaacactctcttatagcccaacggaaaatgctgtt
ttgatctgttcagatgtggatggtggatcttatgaactttatatcttaccaaaggacggc
ggcattggtagagttgatcttgtgcaagaatcaatgagaggcataggaacttcagctgtt
tttgtggctcgtaataggattgcagtgcttgacaagagtaacaacatggcattagtcaag
aacttaaaaaatgaaattgtgaagaaaagcagtcttcctgttgttgctgatgcaatattc
tatgctgggacaggtaatctactatgccgggctgaagatagggtggtcatctttgatctt
cagcagagaattgtgcttggagagcttcataccccctttattagatatattgcttggtca
aatgacatggagtgtgttgctttgctcagcaaacatgctatagtaattgctaccaagaag
cttatgcatcagtgtacagttcacgaaacaatccgcataaagagtggtgcctgggatgat
aatggtgttttcatatatacaaccttgaaccatatgaaatattgccttccaagtggagac
actggaattatcaggacccttgatgttcctttatatatcacaaaggtttctcagaatatt
gttcattgtctggacagggatggaaaacaccgttccataacaattgatgcaactgagtat
gttttcaaactttcacttgtaaagaaaaggtttgatcatgtaatgagtatgatcaagagt
tcaaggctctgtggacaagccacggttgcctatctacaacaaaaagggttcccaggaatt
gcccttcatttagtcaaagatgaaagaactcaatttaacttagcactagaaagtggtaat
attcaaatagctgttgcatcagcaaaggagatagatgagaaagaacactggtataagtta
ggtgtggaggctctccgacaaggcaatgccagcattgtggaatatgcataccagaggaca
aagaattttgagaggctatcctttctttatcttgtaacagggaatctggaaaaattgtcc
aaaatgctgcgaatagctgaggtgaagaatgatgtaatggggcagttccacaatgccctg
tacttgggtgatattcaagagcgtgcgaaaattctagagcatgctggacacttacctctt
gcatatgtcacggctaaagttcatgggctgaaggaaattgctgataagcttgctagtgag
ttgggtgatacagttccatctgtacctgaaggaaaagtcccttctcttctgattcctcca
gcacctattgtatatggtggagattggccccttctgagggtcatgaaaggcatgtttgat
ggtgagttggacaatatgggcaaggcaggacaagaggaagaggatgagtctgttgacggt
gattgggttgaggacctggacattgctgatgtagatgacatgctgaatggagatattggg
gtggttattgacaatgatgaaatcaatgaaggaaatgatgcggagggaggatgggatctt
gaggacctggatctaccggctgaagttgattcaccaagcactgcaattagtggccgcgca
gctgtatttatagccccaacaccaggcacacatgtttcccaactctggattcaacgatct
tctctagctggcgagcatgcagcagctggcaattttgatactgcaatgcgcttactgaac
cgacaattgggtgtgaagaactttgctcccctgaaaccaatgttaatggatttgtacctg
ggaagtcattcatatgtacgaggatttgattctgtgccagtgatcaccaaggcaattgag
aggggatggaatgaatctgccggccccaacatgaggtaccctccagcccttgtgtttgaa
ctttctcagttggatgataaacttaaaacagcttataaggccactacagaaggtaagttt
gttgaggctttaagggttttcctcaacatcttgcacacaattccactaattgtcgttgaa
tcaaggagagaagttgacgaagttaaggagttgattgtaatagcaaaagaatatgtcctg
ggattaaagatggaagtcaaaagaaaggaaattaaagatgacgttgttcgtcagcaggaa
ttggcagcctactttacccactgcaatcttcagatgatccatttgaggcttgctctgaat
agtgccatgggaatttgctacaaggctggaagtttaattacagcaggaaattttgcaagg
cggtatttggaaactaatccttccaatgaaaatcaagtaagaagggcaaggcaagtcctg
caggcttgtgacagaaatatgaaagatgcaaccttgttgaattatgacttcaggaatcct
tttgtggtttgtggaggaacatacgtgccgatataccatggacaaaaatatgtatcttgc
tcatattgtggttcacattttgtacctacatttgaggggcagctctgtgctgtttgtgac
ctttctatagttggctcagatgcatctggtctgctttgttccctttcacaggggagatga
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integrated database retrieval system
