KEGG   Telopea speciosissima (New South Wales waratah): 122653019
Entry
122653019         CDS       T07910                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
tss  Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:tss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tss03009]
    122653019
   04121 Ubiquitin system [BR:tss04121]
    122653019
Ribosome biogenesis [BR:tss03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    122653019
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122653019
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_DCAF4 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st eIF2A Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_WDR19_1st WD_LRWD1 VID27
Other DBs
NCBI-GeneID: 122653019
NCBI-ProteinID: XP_043702867
LinkDB
Position
2:68426956..68440067
AA seq 452 aa
MKVKVISRSTDEFTRERSQDLQRVFHNFDPNLRTQEKAVEYVRALNAAKMEKIFARPFIG
AMDGHIDAISCMAKNPNHLKGMFSGSMDGDIRLWDISSRRTVCQFPGHQGAVRGLSVSTD
GCTLVSCGMDCTVRLWNVPAASSMESDNSYDNPAKPLAVYVWKNAFWAVDHQWEGDLFAT
AGAQVDIWDRNRSQPINSFEWGNDTVISVRFNPGEPNVMATSASDRSITLYDLRMSSPAR
KLIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLNEAKCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSSDATYVISGSDDTNLRLWK
SKASEQLGVLLPRERKKQEYLEAVKNRYKHLPEVKRIVRHRHLPKPIYKAAALRKTMTEA
EKRKEERRRAHSAPGSMPMEPLRKRRIIQEVE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgaaggtcaaagttatttcccgttccacggacgaattcacccgagagcgcagccaggat
ctccagagggtttttcataactttgaccctaacctgcgaactcaagaaaaggctgtcgaa
tatgtccgtgctcttaatgctgccaaaatggaaaagatattcgcgagaccttttattggt
gcaatggatggacacattgatgcaatctcatgtatggcaaagaatccaaatcacttgaaa
gggatgttttcaggttcaatggatggagatattcgtctttgggatatatcttccaggcga
acagtttgtcagttccctggtcatcaaggtgctgtgcgtggtttaagtgtatctacggat
gggtgcactcttgtatcatgtggaatggattgcactgttagactctggaatgttcctgcc
gcaagtagtatggagtccgacaactcatatgataatcctgccaagccactggcagtttat
gtttggaagaatgctttctgggcagttgatcaccagtgggaaggtgatctctttgctaca
gctggtgcccaagttgatatttgggatcgtaataggtcgcaaccgatcaacagttttgaa
tggggaaacgacactgtcatatctgttcgatttaatcctggagaaccaaatgttatggct
acatcagctagtgaccgcagcataacactatatgatttgcgtatgtcatccccagcaaga
aagcttatcatgaggaccaaaaccaattctatctcttggaatccaatggagccaatgaac
tttaccgctgcgaatgaagattgcaactgctatagctatgatgctagaaaactgaatgaa
gcgaagtgtgtacacaaagatcatgtttctgctgtgatggatattgattactcgcccact
ggtagggaatttgtaactgggtcttatgatagaacagtaagaatcttccaatataatggt
ggccatagccgggagatataccataccaaaagaatgcaaagggtattctgcgtgaagttt
agcagtgatgcaacttatgttatttcgggaagtgatgacaccaatcttcgtctatggaaa
tcaaaagcatcagaacagttgggagtgcttcttccaagggaacgtaagaagcaagagtac
cttgaagctgtcaagaatcgctacaagcacctacctgaggttaagcgcattgtgaggcat
aggcacttgccaaaacccatatataaggctgctgctctaaggaaaacaatgactgaagct
gagaagagaaaggaggagaggaggagagctcacagtgccccaggaagtatgcccatggag
ccattacggaaaagaagaatcatccaggaggttgagtga

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