Telopea speciosissima (New South Wales waratah): 122653088
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Entry
122653088 CDS
T07910
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122653088
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122653088
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122653088
NCBI-ProteinID:
XP_043702953
LinkDB
All DBs
Position
2:12856402..12859323
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AA seq
502 aa
AA seq
DB search
MLPGTCILLICFLTCFTTLIGASLNLTLPHQHPDPEAVVQEVQRRVNASVSRRQMLGVWE
NDQSSSSTCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGAGALGGKGGQIYVVTDSSDN
DAVTPTPGTLRYAVIQEEPLWIIFSGNMLIKLKQELIFNSFKTIDGRGANVHIVGGGCIT
LQYISNVIIHNIHIHHCVPSGNTIVRSSTTHYGYRTKSDGDGISIFGSRNLWIDHCSLSY
CTDGLIDAIMGSTGITISNNYFAHHDEVMLLGHSDSYQPDSGMQVTIAFNHFGEALVQRM
PRCRRGYFHVVNNDFTQWEMYAIGGSSNPTINSQGNRYTAPTDPNAKEVTKRVDTDEKDW
AGWNWRTDGDILVNGAFFVPSGEGLGAKYSKAESVEPKSAALIDQLTGNAGVLGGTRDNS
ASISYPGFNNGGAGSGGTGVLSCGGGGGGDTDYFGIMFGSSAPPSPSPSPLLSSIIIIPS
LLLLLYFSTITTTHFFLITSLL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctggcacctgcattctcctaatttgtttcctaacctgctttacaacccttatc
ggagcatctctgaacctcactcttccccatcaacatcccgaccccgaagctgtcgttcaa
gaagttcaaaggagagtgaatgcgtcggtgtctcggaggcaaatgttgggagtttgggaa
aatgaccaatcttcgtcgtcgacgtgcttgacaggaaaccccatagatgactgttggaga
tgtgacccaaactgggcagccaaccggcaacgcttagccgattgtgggatcggatttgga
gctggggcactgggtggaaagggcggtcagatctatgtagtcacagattcgtcggacaat
gacgccgtaactccgacgccggggactcttcggtacgccgtgattcaagaagaacccttg
tggatcatattctcgggaaatatgctaataaagttaaagcaggaactgatcttcaacagc
ttcaaaaccatcgacggcaggggagctaacgtccacatcgtgggcggtggatgcattaca
ctccagtacataagtaatgtgatcatccacaacatccacatccaccactgcgtgccttcc
ggaaacacgatcgtgaggtctagtaccacacattacggatatcggacgaaatcggacggt
gacggtatctctatatttgggtctaggaacttatggatcgatcattgctctctctcttac
tgcacggacggtctgatcgatgcgattatggggtccacggggatcacgatttcgaacaat
tacttcgcgcatcacgacgaggttatgctgctgggacacagtgacagctatcagccagac
tctgggatgcaggtcaccattgcgtttaaccattttggagaagcgctggtgcagagaatg
cctaggtgtcgacgtggatattttcatgtagtgaacaatgattttacacaatgggagatg
tatgctattggtgggagttctaaccccaccattaacagtcagggtaaccgctatactgca
ccgacggatcctaacgccaaagaggtgacaaagcgagtggatacagacgagaaggactgg
gcgggatggaattggaggacggacggggacatattggtgaacggggcgttttttgttccg
tctggggaagggttgggagcgaagtactcgaaggcggagagcgtggagcccaaatcagcc
gcactgattgaccagctcaccgggaatgctggcgtcttaggtggcaccagggataacagt
gcgagcatatcatacccgggattcaacaatggtggggcaggcagcggcggcactggagtg
ttatcctgcggtggaggcggtggtggtgacacggactactttgggatcatgttcgggagc
agtgcacccccatcgccttcaccctcacctttattgtcttctattattattattccttct
ttattattgttgttgtatttttctaccatcaccaccacccatttcttccttataacatca
ctattatag
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