Telopea speciosissima (New South Wales waratah): 122653245
Help
Entry
122653245 CDS
T07910
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6-like isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tss01002
]
122653245
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122653245
Enzymes [BR:
tss01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122653245
Peptidases and inhibitors [BR:
tss01002
]
Cysteine peptidases
Family C85
122653245
Ubiquitin system [BR:
tss04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
122653245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
UBA
Motif
Other DBs
NCBI-GeneID:
122653245
NCBI-ProteinID:
XP_043703147
LinkDB
All DBs
Position
2:complement(23625655..23685189)
Genome browser
AA seq
538 aa
AA seq
DB search
MTRILIQRGSSGSSSNPCRSTLPSSSSALTQQLVTPLLPSGTKEEEQEEEVQEFVASDDL
FHLCESGDDNKSARADESLPESIQGGQNGNAFDDYFDKEKTSDEDAMNFGVVMNELVGLR
ITENLELSENQGSSGGTSQVVSSSSHPPPPPPVPPLKPLVVHTSSRRTVLGNSNTGRTGS
SRRALAWPVAARTSPSGSRPPSPRSYGEGEDYNSADEQSQYFGSSYDDAERECQFEIDIR
RAKGLEVRRMVEDGNCLFRAVADQVYGDTETYHLIRQMCIDYMERERDHFSQFITEGFTS
YCKRKRRDKVHGNNVEIQALSEMYNRPIHIYSYSTEPINIFHGSYNTDSPPIHLSYHLSN
HYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIRAQQDQQIDNALLAEGRFYSDLEL
TEKEIEHMVMEASRAEYLANDKSRQQVGFRESSASSAEPSSSGTMTGPSSSVSQVKYRTE
RGLPDTILSSNMQMVLSMGFSYLQVIEAYSIFGDDVVSIVCYLLETDSSSRRKGKAAE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtatcttaattcagcgtgggtcctctggttcttcatcaaacccttgtcgctcg
accttgcctagctcctcttcagctctaacacagcagctcgtcacacctctgcttccttct
ggcactaaagaagaggaacaggaggaagaagtgcaggaattcgtggcctcagatgatctt
tttcacctttgtgaaagtggagatgataataagtcagcgagggctgatgagtcattacct
gaaagcattcagggtggtcaaaatggaaacgcgtttgatgattattttgataaggagaaa
actagtgatgaggatgctatgaatttcggggtcgtgatgaatgagttggttggcctgcgg
attactgagaacctcgagttaagtgaaaatcaaggatcgagtggtggtacttcccaggta
gtgtctagtagctcccatccccctccacctcctcccgtccctccacttaagcctctggtg
gtacacacgagttcaaggcgaactgttttaggcaattcaaacactggccggactggttct
tctagaagagcattagcctggcctgttgccgctcggacttccccatctggttcacgtcct
ccttctccaaggtcttatggtgaaggggaggattacaatagtgcagatgaacagagtcaa
tattttggatcctcctatgatgatgcagagagagaatgccagtttgagattgatataaga
cgagccaagggtttagaagttagacgaatggtggaggatggaaactgcctgtttcgtgct
gtcgcagatcaagtgtacggggacactgaaacatatcatttgattaggcaaatgtgtatc
gattatatggagagggagagggatcacttctcccaatttataacagaaggtttcacatct
tattgtaaaaggaagaggcgagacaaggtgcatggaaacaatgtagagatccaggctcta
tctgaaatgtacaatcgtcctatccatatttattcatacagcacagaacctatcaatatt
tttcatggtagctacaatacagatagtcctcctatacatctaagttatcatctcagtaat
cattacaattcgcttgttgatccacgtcgattgacaattggtgcaggccttggattcagt
agtctccgagggacaaacgttgataaagatcaagtgaaagctgctatcagagctcagcaa
gatcaacagattgataatgctcttcttgctgagggacgattctactcagatcttgagctc
actgagaaggaaattgagcacatggtgatggaagcttcaagggctgagtatcttgctaat
gacaagtccagacagcaggttggcttcagggagtcttctgcttctagcgctgagccatca
tcctcgggaactatgacagggccatcaagtagtgtgtcccaggtgaaatataggacagag
aggggtttgcctgatactatccttagcagcaacatgcagatggtcttgtcaatggggttc
agttacttgcaagtgattgaagcttatagtatctttggagatgatgtggtttcaattgtt
tgctacctattagagacggacagtagcagcagacgcaaagggaaggcagcagaatga
DBGET
integrated database retrieval system
