Telopea speciosissima (New South Wales waratah): 122653467
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Entry
122653467 CDS
T07910
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03410
Base excision repair
tss03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122653467
03450 Non-homologous end-joining
122653467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122653467
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122653467
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122653467
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
122653467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
HHH_5
Cdd1
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
122653467
NCBI-ProteinID:
XP_043703235
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All DBs
Position
3:complement(8878196..8892361)
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AA seq
529 aa
AA seq
DB search
MFEGMVVFLVEAEVQPRRLQIWKQKLVQMGATIEDRLSKRVTHIFAMNSKALLNQVDRYW
LTRFRVSLLLYQWLEESLRLGEKVPEDSYNLKLESEVGEEEKSLEAISSEPANDNNSGGG
KPSPRKKIKNSPGDSNVASLVSGEDNRKGPGDEAPTTTGGSDDSTQYTPSPENYSQYIPD
TSNKDISSSELSLAYSPPDLNRNITEIFGKLVNIYRALGDDRRSFSYSKAIPVIEKLSFK
IESVDQVKHLPSIGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGPATAL
KLYEKGHRSLDDLKNEDSLTNAQKLGLKYFDDIKKRIPRHEVQEMDSLLQKAGEDVLPGV
VVVCGGSYRRGKATCGDLDIVITHPDGKSHKGFLTKYMKHLKDIGFLREDLIFSTHSEED
PDSGVDTYFGLCTYPGRELRHRIDLKVYPKDIYAFGLIHWTGNDVLNRRLRILADSKGYR
LDDTGLFLATQGSGGKRGARASTSLSFKTEKEVFDFLGFPWFEPHERNL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggggatggtggtcttcttggttgaagctgaagtacagccacgcagattgcag
atatggaaacagaagctggtgcagatgggagctaccattgaggatcgcctttcaaagagg
gttactcatatttttgccatgaactccaaagcccttctaaaccaagtggataggtattgg
ttgacgcgttttagagtgagtttactcctttaccagtggctggaggaaagcttgagatta
ggagaaaaggtgcctgaggattcatacaatctaaaactggagtctgaagtgggggaggag
gaaaaatctttggaggcaatctcatctgaaccagcaaatgacaacaattcgggtggtggt
aaaccttcccctcgcaaaaaaataaaaaattctcccggggattcaaatgttgcaagtcta
gtgagtggggaagataatcgaaaaggtcctggagacgaggcaccaactactactggaggt
tctgatgactccactcagtatacaccaagtccagaaaattatagtcaatatattcctgat
acttcaaataaggatataagttcttcagagttatccctggcctatagtccacctgattta
aataggaatatcacggagatatttggaaaacttgtcaacatatatagagccctaggtgat
gacaggaggtcttttagttattccaaagctattccagtgattgagaagttatctttcaag
attgaaagcgttgatcaggtcaaacacctgccctcaattgggaagtcaatgcaggaccac
attcatgagatagtgactactggcaagttgtcgaagttggagcactttgagacagatgaa
aaggtgcggacaatctctttgtttggggaagtttggggtgttggtccagctactgctctg
aaactctatgagaaaggacatcgctcactagatgatctgaagaatgaggattccttaaca
aatgcacagaagttagggttgaaatattttgacgatatcaagaagagaattccacgtcat
gaggttcaagaaatggactctcttttacagaaagctggagaagatgttttgcccggggta
gttgttgtatgtggaggatcatacagacgtggaaaggctacatgtggtgatctggacatt
gtaattacacatcctgacggcaaaagtcataaaggatttttaacgaaatacatgaagcat
ctgaaagatattggttttttaagggaggatttgatctttagcactcacagtgaggaggat
cctgattcaggggttgacacatactttggtctttgtacatatcctggtcgagaattacga
catcgaattgacctcaaggtgtacccaaaggatatatatgcatttggattaatacattgg
acaggaaatgacgtactcaataggaggttaaggatacttgcagattcgaaaggctaccgg
cttgatgatacagggctctttctggccactcagggttctggagggaaacggggtgcaaga
gctagcacaagtttgagctttaaaacagaaaaagaagtgtttgatttcttgggatttcct
tggtttgaacctcatgaaaggaatttgtaa
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