Telopea speciosissima (New South Wales waratah): 122653518
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Entry
122653518 CDS
T07910
Name
(RefSeq) uncharacterized RING finger protein C548.05c-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122653518
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122653518
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122653518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
Prok-RING_4
Rtf2
zf-RING_4
zf-RING_10
zf-rbx1
Rad50_zn_hook
Zn_ribbon_6
zf-Vps39_C
RING_XB3-XBAT31
Sina_RING
zf-RING_6
zf-Nse
zf-ANAPC11
TerY_C
Motif
Other DBs
NCBI-GeneID:
122653518
NCBI-ProteinID:
XP_043703305
LinkDB
All DBs
Position
3:71736919..71754802
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AA seq
227 aa
AA seq
DB search
MSTRGLRRPLKGYVRDFRRRKMVLNVDLNDTPPAEGRDLEEISTGTGSQGGQTSVQGWAL
VPAATIDVDAIDDDVVISSPRSFAEARNNSRRNHGVTVVLDDESDINQRNSGDLINSLSL
NGHNKRRRVSPNQTIINCELYINLDGSNNAKNELKSPEPPVPPPPMEPTFSCPVCMEKLV
EETSTKCGHIFCKRCIKVAITAQHKCPTCRRRLTMKDIIRIYLPAAN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcgtggtctgagacggcctttgaaagggtacgtgagggattttcgccggaga
aagatggtgctgaacgtggaccttaatgatacacctccggctgagggtagggatctggag
gagatctctactggaactgggtctcagggaggacagactagtgtgcaaggatgggctttg
gtacctgctgcgacaattgatgtggatgccattgatgatgatgttgtgatctcatcccca
aggagttttgctgaagctaggaacaattccaggaggaaccatggggtaactgttgtgctt
gatgacgagtctgatattaatcaaaggaactcaggagacttaattaacagcttgtccctc
aatggtcacaacaaacgcagaagagtttcaccaaaccagactattatcaactgtgaactc
tacataaacttggatggcagtaacaatgccaagaatgagttgaaatctccagaaccacct
gtaccaccgccaccaatggagcccaccttcagctgccctgtttgcatggaaaaactggtc
gaggaaacgtcaactaaatgtggccacatcttctgtaagagatgcatcaaggttgctata
actgctcagcataaatgtcctacctgtagacggaggctcactatgaaagacatcattagg
atctaccttccggctgccaattga
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