Telopea speciosissima (New South Wales waratah): 122653578
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Entry
122653578 CDS
T07910
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tss03000
]
122653578
03036 Chromosome and associated proteins [BR:
tss03036
]
122653578
Transcription factors [BR:
tss03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122653578
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122653578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Apc5_N
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
122653578
NCBI-ProteinID:
XP_043703388
LinkDB
All DBs
Position
3:complement(66529340..66647266)
Genome browser
AA seq
1521 aa
AA seq
DB search
MACTMNGTEEQQEEGEDVASASSDSCTDNDLDEDELSTSQYDDESRIEVPLTDEEIDELI
AEFLEVESKAAEAQESLEKESLAQVESEVRAELVQTFHGDDLEMAVTSEMRTFVEQWEAV
LDQLEMESAHLLEQLDGTDVDLSMLYKAIESQAPNVCCTEAWKKRVHWVGSQVTSEITES
ISVAEKYLQTHQPVRRKRGKLTEEGASGFLWKKIANENNVDGVLENSEDEWESFYKTIKS
HKASVSDDTSFGSKHWAAVYLAETPKEAASLGLKLPGVDEVEEINDVEINSSHPFYAAAI
ANEQEIVLSEEQKKNIKKVKEEDDANIARKHQLHLKQRRRRNRSKQEIIQKDTSADEVQE
SNLVDSVPSNGCSQVASGALGCGNGPVALNVDNSDTSQALKAEVLQGCAASNEHDKEKLM
GDGNFAVLAESVSPDLTETRVSKRLHEEINCEDIEKKKSRTVVIDSDDEVHGMEDKSASH
ICSEPDVKTDSALEAKEEVDLVDADSSPLRIPNGIETLETFQCTACAKVVRACDVHCHPI
LKVIICERCKIILKEKMHEKQDPDCSECYCGWCGRCKDLISCKSCKILFCSSCIKRNFGE
EKFSESHDSTWLCCCCSPILLKSLTLECDKALGAGGLMVSSSDSGSELSDVEIGVKISTM
KRRKKKIRRILDDAELGEETKRKIAIEKERQEHLKSLKVQFTAKPWSGITVNCEGNVPEG
TDIEMLGDMINGYIVNVVREKDEEAVRIPPSISAKLKAHQIAGIRFMWENIIQSVRKVKS
GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLGLKTALIVTPVNVLHNWRREFVKWQP
TELKPLRVFMLEDVPRERRLEWLVKWRAKGGVFLIGYSAFRNLSLGKNVKDRHAAREICY
SLQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE
GFLGSSHEFRNRFQNPIENGQHTNSTSVDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL
PPKTVFVIAVKLSPLQRKLYKRFLDVHGFTNDKVSGEKIRKRSFFAGYQALAQIWNHPGL
LQMAKEHRGYVRQEDAVENFFDDDSSSDDNIDRETVAGDKVRSKNDCMDKKSDNGFFHED
WWSDLLHEKNYREADYSGKMVLLLEILSMSSEAGDKALVFSQSLTTLDLIEFYLSKLVRK
HGAGKYWKQGKDWYRLDGSTDGSERQKLVEKFNEPNNTRVKCVLISTRAGSLGINLHAAN
RVIIVDGSWNPTHDLQAIYRVWRYGQKKPVYAYRLMAHGTMEEKIYKRQVTKEGIAARVV
DRQQIHRTMSKEEVLHLFDFGDDESFDLVREQCHGNLSSSHQNSSGHVGGSLKQKSAFPN
GNCCSDKLMESLLSTHYPRWIVNYHEHETLLQENEEEKLSKEEQDMAWETFRRTIEWEEV
QRVSLDESTYERKLTMAKAGAPAPESIKSSQAMGSSRNRLVQRKCTNLSHLLTLRSQGTK
AGCTTVCGECAQEISWENLGR
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcactatgaatggaactgaggaacaacaggaggaaggggaagatgtggcaagt
gcttctagtgattcatgtacagacaatgatttggatgaggacgaattatcaacatctcaa
tatgatgatgaatctcgtattgaggtacctttgactgatgaagaaatagacgagttaatt
gctgagtttttggaagttgagagtaaggcagcagaggcgcaagaatcacttgaaaaggag
tcacttgctcaagtggagagtgaagtccgggcagagttggtacagacttttcatggggat
gatttggagatggctgttacttctgaaatgagaactttcgtagaacaatgggaagctgta
cttgatcaactagagatggagagtgcccatttgttggaacaacttgatggcactgatgtt
gacctttcaatgctgtataaagcaattgaaagtcaggctcctaatgtttgttgcactgaa
gcttggaagaaaagggtacactgggtaggatctcaggtaacaagtgaaattactgaatca
atatcagttgcagagaaatatctgcaaacacaccaacctgtaaggagaaaacgtggaaaa
cttactgaggaaggtgcgagcgggtttctgtggaaaaaaattgccaatgaaaacaatgta
gatggtgtactggaaaattcagaggatgagtgggaatctttctacaaaactattaaatct
cataaagcgtctgtgtcagatgatacttcatttggtagcaagcactgggctgccgtttat
ttggctgaaacaccaaaggaagctgcaagcttgggactcaaattgcctggagttgatgag
gtggaggagataaatgatgttgaaataaactctagtcatcctttttatgcggctgccata
gcaaatgaacaggaaatagttctttctgaagaacaaaagaagaacattaagaaggtcaag
gaagaagatgatgcaaacattgcacgaaaacatcaactacatttgaaacagagaagacgg
agaaacagatctaaacaggagataattcagaaagatacttcagcagatgaggtgcaggaa
agcaatttggttgactctgtgccttcgaatggctgctctcaagtggcttctggagcgttg
ggttgtgggaatggtccagttgctcttaatgttgacaatagtgatacttcgcaagctttg
aaggctgaggtgcttcaaggttgtgcggcttctaatgagcatgacaaagaaaaactaatg
ggtgatggcaattttgcagttcttgctgaatctgtttcacctgatttaactgagacaaga
gtctccaagcgtttgcatgaagaaattaactgcgaggacattgagaaaaaaaagagccgt
actgttgttatagatagtgatgatgaagtacatgggatggaggataaatctgcttctcat
atttgtagtgagcctgacgtgaaaacagattctgcattggaagctaaagaagaggttgat
cttgttgatgctgattcttctcctttgcggattccgaatgggatagaaactttggagacg
ttccagtgcactgcttgtgctaaagtagttagagcgtgtgatgtacactgtcatccaata
ttgaaagtcatcatttgtgaaagatgcaagattatattgaaagaaaagatgcatgaaaag
caggatcctgattgctcagagtgttattgtggatggtgtgggaggtgcaaagacctcata
agctgtaaatcatgtaaaattttgttctgttcatcctgtataaaaaggaattttggtgaa
gaaaagttttcagaatctcatgactctacttggctttgctgttgctgttctcccattctc
ttgaaaagtttgacattagaatgtgataaagctcttggtgctggtggtttgatggtttct
agctctgatagtggctctgagctttcagatgttgagatcggtgttaaaatcagcacaatg
aaaagacgtaagaagaagattaggaggatccttgatgacgctgaacttggagaagaaacc
aaacgaaaaattgctattgaaaaggaacgtcaagagcatttgaagtcattgaaagtacaa
tttactgctaaaccatggagtgggattactgtgaattgtgagggaaatgttcccgaaggt
acagacattgaaatgcttggcgatatgataaatggttacatagtgaatgttgtgagggag
aaagatgaggaagcagtgagaatccctccaagtatctcagccaaattgaaagctcatcag
attgcagggatacgctttatgtgggaaaatatcatacagtcagtccgaaaagtaaaatct
ggggacaaaggtcttggttgcattctagctcataccatgggtcttggtaaaacttttcag
gtcatagcttttctttacacagctatgcgaagtgttgacttaggtttgaaaactgcactt
atagttacacctgtgaatgtgctgcacaattggcggcgtgagtttgtgaagtggcagcct
actgaactaaagcctcttcgtgtcttcatgctggaggatgttccaagagagagaaggtta
gagtggcttgtgaagtggagagccaaaggtggtgtattcttgattggctacagtgctttc
cgaaacttatcccttgggaagaatgtgaaggataggcatgctgctagagagatatgttat
tccctgcaggatggacctgatatcctagtttgtgatgaggcccacatgatcaagaacact
agggctgacaccacccaagctctgaagcaagtgaagtgccagagaaggattgcattaact
ggatcacctctacaaaataatctaatggaatattattgtatggttgattttgttagagaa
ggatttcttggtagcagccatgagtttaggaaccggttccaaaatcctatagagaatggt
caacatactaattctacatcagttgatgtaaagattatgaaccagaggtcacatatcctc
tatgaacagttgaaaggatttgttcaaagaatggatatgaacgttgtgaagaaggacttg
ccccccaaaactgtgtttgtaattgctgtaaagctttctccattacaaaggaagttgtac
aaaagatttctagatgtgcatgggttcacaaatgacaaggtttctggtgagaaaataagg
aagcgttccttttttgctggatatcaggcattagctcagatatggaaccatcctggcctc
ttgcaaatggctaaagaacacagaggctatgtaagacaggaagatgctgtggagaatttt
tttgatgatgatagttccagtgatgataacatagaccgcgaaacagtagctggagacaag
gtgaggagcaagaatgactgcatggataagaaaagtgataatggcttttttcacgaggat
tggtggagtgatttacttcatgaaaaaaactatagagaagctgattacagtggtaaaatg
gttttgctgcttgagattctatctatgagttctgaggcaggtgacaaggcattagttttt
agccagagtttaacaactctggatcttattgagttttatctctcaaaattggtacgaaaa
catggagctggaaagtattggaagcaaggaaaggattggtacaggctagatggaagcaca
gatggttctgaaaggcaaaagctggttgagaagtttaatgaacccaacaatacaagggtg
aaatgcgttttgatatcaactcgagctggatctctgggaatcaatcttcatgctgctaac
cgtgtaatcattgttgatggttcatggaatccaactcatgatctccaggctatatatcgg
gtttggaggtatggtcagaagaaaccagtatatgcctaccgcttgatggcacatggaaca
atggaagagaaaatatataaacgtcaggtgacaaaggagggtattgctgcaagagtggtg
gatagacagcaaatacatagaactatgtctaaagaggaagtgttacatctatttgacttt
ggtgatgatgagagttttgatttagtgagagaacagtgccatgggaatctatcttcatct
catcaaaattcgagtggccatgttggaggttcactgaagcagaagtcggcttttccaaat
ggaaattgttgttcagacaagttaatggaaagcttacttagcacacactatccaaggtgg
attgtgaattaccatgagcatgagacgctcttgcaagagaatgaggaggaaaagctatcg
aaagaggagcaggacatggcgtgggaaacattccggcgtaccatagaatgggaggaagtg
caaagagtctccttggatgaatcaacgtatgagcggaagctgacaatggctaaagcaggt
gctcctgcacctgagagcatcaagtcttcacaagccatgggcagttcaaggaatcggtta
gtgcagagaaaatgcaccaatctttcacatttgttaactcttaggagccaaggaactaaa
gctggttgcacaactgtgtgtggcgaatgtgcacaggagatcagctgggagaaccttgga
cggtaa
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integrated database retrieval system
