KEGG   Telopea speciosissima (New South Wales waratah): 122653616
Entry
122653616         CDS       T07910                                 
Name
(RefSeq) splicing factor U2af small subunit B-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122653616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122653616
Spliceosome [BR:tss03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122653616
 Complex B
    122653616
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 122653616
NCBI-ProteinID: XP_043703453
LinkDB
Position
3:64732982..64736506
AA seq 341 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLIANMYQRPDMITP
GIDPQGQAIDPHKVQEHFENFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREED
HAANAVKNLNGRFYAGRPIMADFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL
RRQLFGRYRRRRSRSRSRSRSPFRNRNYEDRPHGGGGGGGGGGGFGGRGRGRGFGRRHDD
RDPHYFDERGRRPRSRSPGRRRGRSPSPGGRRNRSPVREGSAERRAKIEQWNREREQAQS
SNKNNSNVDPNDNESNGYNENGGLYNDQQQQQPPQQGGYGY
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatctatatttggtacagagaaggatcgggttaattgccctttt
tacttcaagatcggggcttgcagacatggtgataggtgttctaggctccacacgaagccg
agcatcagtccaacattgcttattgccaatatgtatcagagacctgatatgatcactcct
ggaattgatcctcagggtcaagccatcgatcctcacaaagtccaggaacattttgagaat
ttttatgaagatctatttgaggagttgaacaaatatggagagattgaaagcttgaatatt
tgtgacaatctggctgatcacatggtgggtaatgtatatgttcagtttagagaggaagac
catgctgcaaatgccgtgaagaaccttaatggaagattctatgcaggacgtccaattatg
gccgacttttctcctgtgacggatttccgtgaagccacatgtaggcaatatgaggagaac
acgtgcaatcgaggtggctattgcaactttatgcatctgaaaaagattagcagggaattg
aggcggcaactatttgggaggtatcggcgaaggcgcagccgcagtcgaagcaggagccga
agtccattcaggaatcgcaattatgaggatcgtccacatggtggtggtggtggtggtggt
ggtggcggtggttttggtggccgtggtcgtggtcgtggttttggtagacgacatgatgac
cgggatccccattactttgatgagcgaggcaggaggcccaggagccgaagcccaggacgg
aggaggggaagaagcccgagccctggaggaaggaggaataggagtcctgttcgggaaggt
agtgctgaaagaagggctaaaattgagcagtggaacagggagagggaacaggctcaatct
agtaataaaaataacagcaatgttgatcccaacgataatgagagcaatgggtataatgaa
aatggaggcctatacaatgatcagcagcagcaacagccaccgcagcaaggaggatatggc
tactga

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