Telopea speciosissima (New South Wales waratah): 122653907
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Entry
122653907 CDS
T07910
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122653907
Membrane trafficking [BR:
tss04131
]
Protein recycling
Others
EARP complex
122653907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
122653907
NCBI-ProteinID:
XP_043703801
LinkDB
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Position
3:complement(32490684..32595312)
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AA seq
1138 aa
AA seq
DB search
MLEVGVEMQPNSPSFRSSVENPFALDGRLIGGFESPRVLFFLSFLFVQGGGMDFSKVGEK
ILSSVRSARSLGLLPSPSDRPEVPARAAAAAAVARALAGLPPHQRLSLPSSSEELVSIYG
SRPRGEIVEELEEDFYEEDFDPVKHVLEHIPSEGDELTYFEKKATLRLAQLDRIAERLSR
HVMEHHEEMVKGMHLVRELEQDLKVANVICMNGRRHLTSSMQEVSRDLVVTSFARKKQAL
LDMLPILTELRHAIDMQVALEVHVEEGNFFKAFQVLSEYLQILESFSELSAIQEMSRGVE
AWLAKTLQKLDSLLLGVCQEFKEESYITVVDAYALIGDITGLAEKIQSFFMQEVLSETNS
MLKSIVQEDQGLHIVEKNRLTYSDLCLQIPESRFRQCLLGTLGVLFKLMCSYYSIMSSQP
DKMDSECQTKHVKQDPNDISACSEDVHLPKNLSKSQAENGSLSDSLDRVPVNSLPVESTT
STIVVNDITGTTGSLSLNAHDATYEGRDDDGNATSSSASWDDLRKDAIAYVAQTLQRGRK
NLWYLTTSRVSVLLSSSAVCSTSMHQFLRNYEDLNVFILAGEAFCGIEAVEFRQRLKIVC
ENYFSAFHRQNVHALKMVLEKETWQIMSPDTIQVISLAGLVGDGAALIAPSDGNPAKFEA
LHSKKSPDPVDSGNQKNGFFQWLRTGNPFLLKLTSGSIESLSSSLLLNGTTDEKLFEVLH
NDKFSPRNVDVNHVNGNNSVPEDENEDLLADFIDEDSQLPSRISKPKLSRNHSSHWNDDE
TTAQTGSSLCLLRLMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFSQRDIHPSG
KGLTESLSCRLRTALSRVTQDCDQWIKPQIVSFSSSSPTSLNTSFPQMDVTPTSPPSHVP
STSFGLKERCAAAETVSLVARILHRSKPHLQSMLLQHNAAIVEDFYANIVDSVPDLAEYI
HRTTARMLLHINGYVDRIANAKWELKDLGLEHNGYVDLMLGEFKHYKTRLTHGGIHKEVQ
DLLLEYGLESVAETLIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSVNVRPKLQIVE
TFIKAYYLPETEYVHWARAHPEYNKNQISGLINLVATMKSWKRKTRLEVLEKIESSNV
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggtgggagttgaaatgcagcccaattcgccctcgttccggagctcggtggag
aatccgtttgccttggatggccgtttaattggtggttttgagagccctagggtgttgttc
ttcctctctttcctgtttgttcaaggaggagggatggatttctccaaagttggagagaag
attcttagctcagttcgatccgccagatctctgggccttctcccttctccttcggatcga
ccagaggttcctgcacgtgcagctgcagcagccgctgttgctcgagctctagcaggactc
cctccccaccaaagacttagtcttccatcaagttctgaagaattggtttccatttatgga
agcaggcctcgtggtgaaatagttgaggaattagaagaggacttctacgaagaggatttt
gatccagtgaagcatgttctggagcatattccatcagaaggagatgaactgacctatttt
gagaaaaaggccactctcaggttagcacagctagataggatagcagaacgactttctcgt
catgttatggagcaccatgaagagatggtgaaggggatgcatctggtgagggaactggag
caagatttgaaggttgcgaatgtcatttgcatgaatgggagaaggcatctaacatcttca
atgcaagaagtatcaagagatcttgttgtcacttcatttgccagaaagaaacaagctctt
ctggacatgcttccaattctaaccgaacttcgtcatgcaattgacatgcaagtggcactt
gaagttcatgttgaggaaggaaatttcttcaaggcatttcaagtcctctcagagtatttg
cagattttggagagtttttcagagctttcagccatacaagagatgagccgcggtgtagag
gcttggctagcaaagacacttcaaaagctagattctctcctattaggagtctgccaagaa
ttcaaagaggagagctacataactgtagtggacgcttatgcattaataggggacataact
ggtctcgcggaaaagattcaaagcttctttatgcaggaggttctatcagaaactaattcc
atgctgaagagtattgtgcaagaggatcaaggcttacatattgtggaaaaaaatagactc
acatacagtgatctctgccttcagatacctgaatcaagatttcgacaatgtttattagga
acattgggtgtcctatttaaattaatgtgttcatattattcaatcatgagctctcaacct
gacaaaatggattcagaatgccagactaagcacgtgaagcaggaccctaatgacatctct
gcatgttcagaagatgttcacttgccaaagaatttgagtaaatcccaagcagagaatggg
tctctttctgattctttggatagagtgccagttaattctttgccagtggaatctacaaca
agcaccatagttgtgaatgatattacaggaaccactgggtccctgtccttaaatgctcat
gatgcaacttatgagggaagggatgatgatggtaatgcaacatcaagcagtgcttcttgg
gatgatttgaggaaagatgctatagcatatgttgcacagacattacagagagggcgaaag
aacctctggtatcttaccacaagtcgtgtgtcagtattactttcgtcttctgctgtttgt
tcaacaagcatgcaccaattcttgagaaattacgaagatctgaatgtcttcatcttagct
ggggaagctttttgtggaattgaagcagttgaattcaggcagaggttgaagattgtttgt
gaaaattacttctcagcctttcatcggcagaatgtacatgcactgaaaatggtcttggag
aaggagacttggcagataatgtcaccagacaccatacaagtaattagtttagcaggcctt
gttggtgatggagcagctttaattgctccatccgatgggaaccccgccaaattcgaggca
cttcattccaagaaatctccagacccagttgactctggcaaccagaaaaatggatttttt
caatggcttagaactggaaatccatttctattaaagctgacgtctggttccatcgaatct
ctgagctcttccctactgcttaatgggacaactgatgaaaagctttttgaagtcttacac
aatgataagttctctccaaggaacgttgacgtgaatcatgtgaatggcaataattctgtt
cctgaggatgaaaatgaggatctcttagcagattttattgatgaggatagtcagcttcct
agtcggatatctaaacccaagctttcaagaaatcattcttcccattggaatgatgacgag
acgacagcacaaacaggatcctcgctttgtcttctaaggttgatggacaaatatgcaagg
ctcatgcaaaaattagaaatagtcaatgttgagttcttcaagggaatctgccaattgttt
gaagtctttttccattttgtatttgaaacattcagtcagcgagacatacatcctagtgga
aaaggcttaacagaatctctttcctgccgactcaggacggcattatctagagttacacag
gattgtgatcagtggataaaaccacagatagtatcattttcttcctcttctccaacttct
ttgaacacatcattcccacaaatggacgttactcctacaagtcctccaagtcatgtgcct
agtacttcatttgggctcaaggaaagatgtgcagctgctgagacggtttctcttgttgct
cgaatattgcatcgatctaagcctcatctccagtcaatgcttttgcaacataatgcagct
atagttgaggatttctatgccaatattgtggattctgtgccagatcttgcagagtacatc
cataggacaactgctaggatgcttcttcatatcaatgggtatgttgatcggatcgctaat
gctaaatgggaactaaaagatcttgggctagagcacaatgggtatgttgatttgatgctg
ggggaatttaagcattataaaacaaggcttactcatgggggaattcacaaagaggttcag
gatctccttttagaatatggacttgaaagtgttgctgaaacacttatcgaaggcctatca
cgagtgaagagatgtactgatgaaggaagagctttgatgtcattagaccttcaggtattg
atcaatggactacaacattttgtctctgttaatgtgaggccgaagttacaaattgttgaa
acttttatcaaggcctactaccttcctgaaactgaatatgtgcactgggcacgtgctcat
ccggaatataataaaaatcaaatctcagggttgatcaatcttgttgccacgatgaaaagt
tggaaaaggaagacgaggttggaggtactcgaaaagatagaatcaagcaatgtgtag
DBGET
integrated database retrieval system
