Telopea speciosissima (New South Wales waratah): 122653947
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Entry
122653947 CDS
T07910
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122653947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122653947
03041 Spliceosome [BR:
tss03041
]
122653947
03032 DNA replication proteins [BR:
tss03032
]
122653947
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
122653947
Spliceosome [BR:
tss03041
]
Complex A
U1 snRNP components
Sm proteins
122653947
U2 snRNP components
122653947
Complex B
U1 snRNP components
122653947
U4/U6.U5 tri-snRNP components
122653947
Complex C
U2 snRNP components
122653947
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122653947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
122653947
NCBI-ProteinID:
XP_043703847
LinkDB
All DBs
Position
3:complement(67371300..67380680)
Genome browser
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNL
GEILIRCNNVLYLRGVPEDEEIEEADQD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtaccagtgaacccaaaacctttcttgaacaatttgactggaaagcccgtc
attgtgaagcttaaatggggaatggaatacaaaggttatctcgtctcagtggattcatat
atgaacttacagctggcaaacactgaagaatatattgatggacagttcacaggaaatctg
ggggagattctgatcagatgtaacaatgttctttatcttcgtggtgtaccggaggatgaa
gagattgaagaggctgaccaagattga
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