Telopea speciosissima (New South Wales waratah): 122653951
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Entry
122653951 CDS
T07910
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122653951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122653951
04121 Ubiquitin system [BR:
tss04121
]
122653951
03036 Chromosome and associated proteins [BR:
tss03036
]
122653951
03400 DNA repair and recombination proteins [BR:
tss03400
]
122653951
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122653951
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122653951
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122653951
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122653951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_6
zf-C3HC4_2
zf-C3HC4
zf-HC5HC2H_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-RING_10
zf-C3HC4_4
Prok-RING_4
PTCB-BRCT
RTT107_BRCT_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122653951
NCBI-ProteinID:
XP_043703850
LinkDB
All DBs
Position
3:65472463..65494228
Genome browser
AA seq
739 aa
AA seq
DB search
MADSVKSGRFLFLNPWILHLQKMCLELKCSLCLNLLNRPLLMPCDHIFCSSCILRSTEFG
SECPACRSPFVDEDLRLAPHMENMVNIYKSMDAAFGTNLLHWVPQSHIDAAVVARASDRL
PVTFTDVIEDRSRKEPVNTKRTRTGTSGNPNSSPALRATEGAKVPLQHSEVKVEKSEIPD
ESHVPSNSGALKKLEQQLGEQRVLQGEESAPSSQAQQLRDESGAPEGYSNQFTQTSPDSP
PSFGAGKDSDDDSTYHGSQHSVDKFSAKSMLNKESVDGFVREMGRGPSTQSGEDHGRESK
RMKLNHEARDIAPENDIHKSPFTGSENVVMSKSIPKNWSSATVQPSVGPDCSVSKSAVIC
AFCQTSSLSQYTGPMMHYANGKEVVPDKVAQSNVLHVHKKCIEWTPQVYFVDDTVYNLEK
EISRGAKLKCSHCGLKGAALGCYEESCQKSFHVPCAVQIEDCWWDIENFLVLCPTHSSKK
FPNETSKLGKRMGACHVSENQIDSCQPIKSGEMLAGNHQGWVLCGSSLSVTEKNLLTKFA
KLTGATISKVWKPNVTHVIAATDEMGACSRTIKVLMAILHGRWVLKIDWIKACLEAVQPL
SEEPFEVQRDIHGCCDGPKNGRLRILEKAPRLLTGLNFYFFGDFVPSYKECLQDLVLAAG
GTFLTNTGILLPQDSKHATSSTFIVYNRDLPENCTSMEEYMEFRFKEAEDFAAEFGCRVI
GHTWLLESIAACKIQLPRC
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctgtgaaaagcggtcgctttcttttcctcaatccatggatactccacttg
cagaagatgtgtctagaactcaagtgttccctatgcttgaacttgctgaaccgaccatta
ctgatgccatgcgatcacatattctgcagttcttgcattcttagatcaacagagttcggt
tccgagtgtcccgcctgtagatcaccttttgttgatgaagatttaaggctggctcctcac
atggaaaatatggttaatatctataagagcatggatgccgcctttggcactaatctcttg
cactgggtacctcaaagtcatattgatgcggctgttgtggcaagggcatcagaccgactc
ccagttacgtttactgatgttattgaggatagatccaggaaggaaccagttaacaccaag
cgaactcgaacgggaacctctggcaacccaaactcatcccctgcattacgtgctactgaa
ggggctaaagttcctttgcaacattcagaagtcaaagttgagaaatctgaaattcctgat
gaatctcatgttccaagtaatagtggtgcgctgaaaaagttagagcaacagcttggggaa
cagagggtgcttcaaggggaggagagtgccccgtcatcgcaggctcagcagcttagagat
gagagtggagctccagaagggtattcgaatcaattcacgcaaacatccccggacagcccg
ccatcttttggcgctgggaaggattcggatgatgacagcacttatcatggtagccagcat
agtgttgataaattctcagcaaaaagcatgctgaataaggaatcagtagatgggtttgta
agagagatgggtcgaggaccatcaactcaatctggagaagatcatggtagagaatcaaag
aggatgaagttgaaccatgaggctagagatattgcccctgaaaacgacattcataagtca
ccttttactggttctgagaatgtggtgatgtctaaatccatacccaaaaattggtcatct
gctactgtgcagccatcagttggtccagactgttcagtttcaaaatcagctgtgatctgt
gcattttgtcagacatcaagtttgtcgcagtatactgggccaatgatgcattatgccaat
gggaaggaagtagtgccagacaaggtagcacaatccaatgtcttgcatgtacacaagaag
tgcattgaatggacaccccaggtgtattttgttgatgatactgtttataatttggagaaa
gaaatttcaaggggtgcaaaacttaagtgcagccattgtgggctgaagggtgcagctctt
ggctgttatgaagaatcctgccaaaaatctttccatgttccctgtgcagtacaaattgaa
gattgttggtgggatattgaaaattttctagtgctttgtcctactcattcttcaaaaaag
tttccaaatgaaacctccaagcttgggaagagaatgggagcttgccatgtttcagaaaat
caaatagacagttgtcaacctatcaaatcaggggaaatgctggctggtaatcatcaagga
tgggttctgtgtggatcttcactctccgttacagagaagaatcttttgaccaagttcgca
aaactgactggtgctactatctccaaggtttggaagccaaatgtcacccatgtgattgct
gcgacagatgaaatgggtgcttgcagcaggactataaaagtccttatggccatcttgcat
gggagatgggtcttaaaaattgactggataaaagcatgcttggaagctgtgcagcctttg
tctgaagagccttttgaagttcagcgtgacatccatggttgttgtgatggccccaaaaat
ggcagacttaggatattggagaaggcaccaaggctattgactggcctcaacttctacttc
tttggtgattttgtgccatcatacaaggaatgcctccaggatttagtgttggctgctggg
ggtacctttcttacgaacacgggcatcttgctcccacaagatagtaaacacgcaacttcc
tcgacattcattgtttacaaccgtgatctcccggaaaattgcacttcaatggaggagtat
atggaatttagattcaaagaagcagaagattttgctgccgaattcggatgtcgagtcatt
ggccatacatggcttttagaatcaatagctgcttgtaagatacagcttcctagatgctaa
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