Telopea speciosissima (New South Wales waratah): 122654259
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Entry
122654259 CDS
T07910
Name
(RefSeq) tRNase Z TRZ3, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122654259
Enzymes [BR:
tss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
122654259
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
122654259
Prokaryotic type
122654259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
122654259
NCBI-ProteinID:
XP_043704194
LinkDB
All DBs
Position
3:16576207..16584260
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AA seq
979 aa
AA seq
DB search
MPKIANFKLFFSTTRSAPLLLSFKPNLSPLLFKHRTPLKPAFPLIVLSSSTGRQRETHPP
HPPRSRSNSTLREAKTREKSMEEAEPIGFNKRRAEGRDKNDRPKDLQLKVRKLNPINTVS
YIQILGTGMDTQDTSSSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSE
TAGGLPGLLLTLAGMGEEGMSVNVWGPSDFKYLVDAMRSFIPNAAMVHTHSFRAAPGADI
AALADLAKFVEPIVLINNEVVKISAILLQPGCSEVRQLMKEDCSMFNSQDPNGKAPPVLK
PGDISVVYVCELPEIQGKFDPAKAVALGLKAGPKYRELQLGHSVMSDRQNIMVHPSDVLG
PSIPGPIVLLVDCPTLSHLQELLSTQSLSTYYVDAVGQNLNTVKSVNCIIHLSPSSITMT
PEYQNWMKRFGGAQHIMAGHEIKNLQIPVLKSSARITARLNYLCPQFFPAPGFWSLQHLM
NSVPEYITSCEGSVQKCCESFSAENLLKFHLRPYAQLGLDRSGIPSLLTPTEVVNELLSE
IPEIEIAAEQVRQFWVKYQKTANVMIEEPWMTGNASAPDINSGKQGADESKNESYLPGCL
ENITREDMEVVLLGTGSSQPSKYRNVSSIYINLFSKGSLLLDCGEGTLGQLKRRFGVKGA
DDAVRSLRCIWISHIHADHHTGLARILALRRELLREVPHESLLVVGPKQLKRFLDAYQKL
EDLDMQFLDCRHTIESSWDAFKDKVESNRNDFPPRSLISVDDKGEGQGVMTIDTTLFARG
SRMQSYWKKPDSPGDSGMGFQILMKLTKVLVEAGLEALISVPVVHCPQSFGVVLKAAERI
NSVGKRIPGWKLVYSGDTRPCPELIDASHGATVLIHEATFEDGMMEEAIVKNHSTTKEAI
EVGASAGAYRIILTHFSQRYPKIPVFDDTHMHKTCIAFDMMSINIADLPLLPEVLPFLKL
LFKNEMMVDESDEAVCQTA
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatcgcaaacttcaaactctttttctctacaactcgttcagctcctcttctt
ctctctttcaaacctaatctttctcctcttctcttcaaacacaggacccctctaaaacct
gccttccctctcattgtcttatcttcgtcgaccggaagacagcgggaaactcatcctcca
catcctcccaggagtagaagcaatagcactctcagagaagcaaagaccagagagaaatca
atggaagaggctgagccaattgggttcaataagagaagagccgaagggagagataagaac
gacaggcccaaggaccttcagttgaaggtccggaaattgaatcccataaatactgtctct
tatattcagattttaggaactggaatggatacacaagacacttcgtcatcagttttgttg
ttctttgacaaacagagatttatattcaatgctggagagggtttgcaacgtttctgcaca
gaacataagattaaattatcaaaggttgatcacatctttctttctcgtgtatgctcagaa
actgctggtggacttccaggtcttctattgactttggctggcatgggagaggaagggatg
tctgtcaacgtttggggtccttctgatttcaaatatttagttgatgcaatgcgatctttc
attccaaatgctgcaatggttcacactcacagcttcagagcagcacctggggcagatata
gctgccttagctgatctggcaaagtttgtagaacccattgttcttattaataatgaggtt
gtcaaaatatcagcaattcttctacaaccaggttgctcagaagtgcgtcaactaatgaag
gaagattgttccatgttcaattcacaagatccaaatgggaaagctccacctgtgctgaaa
cctggtgatatttctgtggtttatgtttgtgaattgcctgaaattcaggggaagtttgat
cctgcaaaagctgttgcccttggattgaaagctggtccaaaatatcgtgaactacaactt
gggcactcagtcatgtctgatcgtcaaaatataatggttcatccgagtgatgtacttggt
ccttccattccaggtcctattgtactccttgtcgactgccctacactgtctcatttgcag
gagttgttgtctacacaatctctcagtacctattatgtagatgctgtgggccaaaacttg
aatactgttaagtctgtgaattgtataattcacttgagtccttcatctatcacaatgact
cctgaataccaaaattggatgaaaagatttggtggagcacagcatatcatggctggacat
gaaataaagaacttgcaaattccagttttaaaatccagtgcaagaatcacagcacgactt
aattacttgtgtcctcagttcttcccagctccaggtttttggtctcttcagcacctaatg
aactccgtgcccgagtacatcacttcatgtgagggttctgttcaaaagtgttgtgaaagt
ttttctgctgaaaatctactaaagttccatttgcgtccttatgcacagcttgggttggat
agatctgggattccaagcttgttgactccaacagaagttgtcaatgagcttctttcagag
attcctgagattgagattgctgctgaacaagttaggcagttctgggtgaagtaccagaaa
actgcaaatgtaatgattgaagagccttggatgacgggaaatgcatctgcacctgatata
aactcaggaaagcagggtgcagatgagagtaagaatgagtcctatcttcctggttgtctg
gagaatataacaagagaagacatggaggttgttcttttgggaactggttcatctcagcca
tccaagtatcgaaatgttagttctatctatattaaccttttctcgaaaggaagcctgctc
ttagattgcggtgaaggaacactggggcagctgaagaggagatttggtgtgaagggtgct
gatgatgctgtgagaagcttaaggtgtatttggatttctcatatccatgctgatcatcac
actggtctagcaaggatacttgctttgcgacgggagttgttaagggaggttcctcatgaa
tccttgcttgttgttgggccgaagcagctaaagagatttttggatgcatatcaaaaactt
gaagatctagatatgcaattccttgattgtagacacacaattgagtcatcgtgggatgct
ttcaaagataaagttgaatcaaacaggaatgactttccgccaaggagtttgatcagtgtt
gacgataagggagaaggacagggtgtaatgacaattgataccactttatttgctagaggc
agtcgcatgcagagctattggaaaaaaccagatagtccaggagattctggcatgggtttc
caaatcctaatgaaactgacgaaagtgctagttgaagcagggttggaagctttgatcagt
gtccctgttgtgcattgtccacagtcgtttggcgttgtcttgaaggcagcggagagaatt
aacagtgtaggaaaaagaattccagggtggaaacttgtttactcgggtgatactaggccc
tgtccagaactgatagatgcatctcatggagcaacggttcttatacacgaggctaccttt
gaggatggaatgatggaggaggccattgtaaagaatcacagcacaacaaaggaagccatt
gaagtgggagcttctgcaggcgcatatcgcattattcttacacactttagccagcgatac
ccaaaaattccagtttttgatgatactcacatgcataaaacatgtattgctttcgacatg
atgagcattaacatagcagacttacctttgcttccagaagttcttccattcctcaagcta
ctcttcaagaatgagatgatggttgatgaatctgatgaagctgtctgtcaaactgcttga
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