Telopea speciosissima (New South Wales waratah): 122654306
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Entry
122654306 CDS
T07910
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122654306
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122654306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
122654306
NCBI-ProteinID:
XP_043704272
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All DBs
Position
3:54337971..54454858
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AA seq
1389 aa
AA seq
DB search
MFYSQFILAKKGPLGNIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFHDCSEALLQIKQAFRSTVVDLPPDESTAPYHSITLPETFDLDDFE
LPDSALFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDLDEDL
FSDKAAASQHAEDLLPSEENVGPACGEPMTPFTGMDIVEDDNNNEMTGEIPEVILFDGSG
KHIGSDAQEVKMDDKSAIHNDQIKSPDLNAEGFWYKQIEGQSANPTTDLVGFTLSPSTNA
LADDAILANVEEDLNKMASPCQSQDWNSINLVVTGKPGDSIKGPDAHIGNENNALECLLL
NDENSGADVLCMPSGKNESLMGGVQAIHVKQQGYSTPSAEGMDPVISGISRLVSSPTSVL
AEQPKPVSPVSECSDRIAAVLDGQDGVISNNGLSIYISPIEQIHAKGMATQEIAVDTTVA
FSACSHEAIMLEEACSRPPCEYDSVSNKETSDSEALKSVELVGDGAELCSCIQELQSGAD
FQSGSVVRYELDQVEGNPSAQPQDSNIMNRYGPSEKSHAGSHLLQPCSLQSNQLGVSSLP
DGSFVENIPDMSCRGDGLCFTPAAERGEMPQGSTPSVDMQGEGCNQGLVGNPIVEPFQSE
DVQAVSKLDEHLNGVVLEDTQLQTSNFSASSDLPAPETLLSVPEGAELPADVMLEPILDE
GSHPTKGSGDVSKILSGKRYRSIEYTPVLQSGNSAKLSGVPQSRNVDSIPDDNDLLSSIL
VGRRSSALKVRPTPPSEVPSSKRLRVATRVHAPKRKVLLDDTMVLHGDTIRQQLTNTEDI
RRIQRKAPCTRPEIWMIQKQLLEIEIFNEPIFTGMSMQLIDLQNRTYDFSKAGLPQIDAN
CTPLGVQKGREQAVSINVAKETGLEGCSEDVAVRNDGEMLPAGIHVQVEEKHSKEHAILE
GCGVVVLVTNEGEAQTASLDSSKDGRLEEINAMEINRVDDGISDVMGHAATQGSKLAVPS
GPLSGDNSNLLADSLKLSPVDNSCGAEVILQNDEGHSPKDQKLGLQPDEKGALIMGDNDG
NDVQALHIVEVNGKSSISPKAVPAAKDESSPVEAEGGLLSEFPQDCQIGVEENTSSPIGA
AELDNCSVVTRADVQLDSSALSFETINSSFPSMCLDSGEQTVVVIVTGDQNLGGNNGLLD
KNVMRSEQVRDEDGVTIRMEDAILEPNMDMEDVSSHRGGDPGCMGANQKNTTDAENSMLH
SSAARDSDVFEDVMDENDTEFLNVDDDEVAGEEDNNMPSAEEFFENSGWSSRTRAVARYL
QTLFDNDAGHERKVVHMDNLLAGKTRKESARMFFETLVLKTRDYIHVEQENSFDNINIKS
RGKLMKANF
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagtttatattggccaagaaagggccacttggaaacatatggattgcg
gcacatttggaacggaagctgcggaagaatcaggtggctgatactgatattggcgtctct
gtggactcaattcttttccctgaagtaccaattgctcttcggttatctagccatcttctg
cttggggtggtgaggatatattcccgaaaggtgaattatcttttccatgattgcagtgag
gctttgcttcagataaagcaagcttttcgttccactgtggttgatctgccaccggatgaa
tctactgcgccttatcactccattactttgccagagacttttgatcttgatgatttcgag
ctgccagacagtgcactttttcagggtaactatgtcgaccatcatgtcagtacgagggag
cagattacacttcaagataccatggatggtgtggtctattctacttcacagtttggattg
gatgagaggtttggtgatggtgatacttctcagattggcttagatcttgatgaggacttg
ttttcagataaagctgcagcttctcaacatgctgaagatttgttgccttcagaagagaat
gtgggtcctgcatgtggtgaacccatgacaccgttcactggcatggatattgttgaggat
gataataataacgagatgacaggtgaaattccagaagtcatattgtttgatggtagtgga
aaacatattggttcagatgcccaagaggtgaagatggatgataaatctgccattcataat
gatcaaattaaaagcccagatttaaatgctgagggcttttggtacaaacagattgagggc
caatctgcaaatcctacaacagatttggttgggtttactctgtccccttctaccaatgca
ttagcagatgatgcaatcctggccaatgttgaagaggatcttaataaaatggcttcacca
tgccaatctcaagattggaattcaataaatttggtggtgacagggaaaccgggtgattct
ataaaaggaccagatgctcatattggaaatgagaacaatgcattggagtgccttttgctt
aatgatgagaattctggggctgatgtcctttgcatgcccagtggaaaaaatgagtctctt
atgggtggtgtacaggcaatccatgtgaagcaacaaggatactctacaccttctgcagaa
ggtatggatccagtaatatctggtatttctcgtttagtttcctcgcctacttcggttcta
gctgaacaacctaaacctgtttctccagtttcagagtgttcagacagaattgcagctgtg
ttggatggtcaggatggggttattagtaacaatgggttgagtatttatatttctcctatt
gaacaaatacatgcaaaaggtatggccacccaagaaattgctgttgacacaactgttgca
ttttcagcttgttctcatgaagctatcatgctggaggaagcctgtagtagaccaccttgt
gaatatgacagtgtttcaaacaaggagacttctgactcagaagctttgaagagtgtggaa
cttgttggagatggtgctgaattgtgttcatgtattcaagaattgcagtctggtgctgat
tttcaatcaggatcagtagttagatatgagcttgatcaagttgaaggtaatccttctgca
cagccacaagattccaatatcatgaatagatatggccccagtgaaaaatctcatgctggc
agccatttgcttcagccatgcagtttgcagtctaaccaacttggtgtatcatctctccca
gatggtagttttgtagaaaatatccctgacatgtcctgcagaggagatgggctgtgcttt
accccggcagcagaaaggggggagatgccacagggttctacaccttctgttgatatgcaa
ggtgaagggtgtaaccaaggcttggttggaaatccaattgtggaaccatttcagtctgaa
gatgttcaggcagttagcaagttagatgagcacctgaatggtgtcgtactggaagacacc
caattgcaaacttccaatttttcagccagttctgacttgcctgcacctgaaacattgctt
tcagtgccagaaggggctgaattaccggctgatgtaatgcttgaaccaattctagatgaa
ggaagccacccaaccaaaggaagtggggatgtgtcgaaaatcctttctggtaaaaggtat
cgttcaatagaatatacaccagttctgcagagtgggaattcagccaagctttctggggtg
ccgcagtcgagaaatgtggattccattcctgatgataatgatttactgtcatccatttta
gttggaaggagatcttcagctttgaaagtgagacctactccgccatctgaagtaccatct
tcaaaacgtcttcgagtggcaacccgtgtccatgcccctaagaggaaggttcttttggat
gataccatggtcttgcatggcgatacaatacgacagcaattgacaaatacagaggacata
cgccgaatacaaaggaaagctccttgtacccgtcccgaaatttggatgattcagaagcaa
ttacttgaaattgagatattcaatgaacctattttcactggaatgtcaatgcagttgatt
gatttgcagaatcgaacatatgatttctctaaagctgggcttccccaaattgatgcaaat
tgcactcctttgggagtacaaaagggtagggagcaggcagtaagcataaatgttgccaaa
gaaactggtttggaaggttgcagcgaggatgttgctgtcagaaatgatggggaaatgcta
cctgctggaatccatgtccaggttgaggaaaaacattccaaagagcatgctatcttagag
ggttgtggtgtggttgtactggtgacaaatgaaggtgaagcacaaacagcttcattggac
tcatcaaaagatggacggttggaggaaataaatgccatggaaataaacagagttgatgat
ggaatttctgatgtaatgggtcatgctgctactcaagggtctaagctggcagtgccctct
ggtcctctttcgggagataatagtaatctgttagctgattctctcaagttgtctcctgtg
gataacagttgtggagcagaagttattctgcagaatgatgagggacattcaccaaaagat
cagaaattgggcctccaacctgatgaaaagggtgctttaatcatgggtgacaatgacggc
aatgatgttcaggcccttcatattgtggaagtgaatgggaaaagctcaatttcacccaag
gctgtacctgctgcaaaggatgagtcttcaccggtggaagcagaaggtggcttgttatca
gagtttcctcaagactgccaaattggcgtggaggagaatacctcctctccaatcggtgct
gctgaattggacaactgttcggttgttacaagggctgatgtgcaactagattcctctgcc
ctctcatttgaaactataaattcttcctttccaagcatgtgcttggacagtggtgagcaa
actgttgtagttattgtaactggagaccagaaccttggaggaaataatgggcttttagat
aagaatgtgatgaggtctgaacaagtgagggatgaagatggtgtgactatccgtatggaa
gatgctatattagaacctaatatggacatggaagatgtgtcctctcatagaggtggagat
ccaggttgtatgggtgccaatcaaaagaacactacagatgctgaaaatagcatgttacat
agttctgctgctagggactctgatgtttttgaggacgtaatggatgagaatgatacagag
tttcttaatgtagatgatgatgaagtggctggagaagaggacaacaatatgccaagtgct
gaagagttttttgagaacagtggatggtcttcccgtacaagggctgttgcaaggtatctc
caaaccttgtttgataatgacgctggtcatgaaagaaaagttgttcatatggacaacctc
ttggctggtaaaacgcggaaggaatcagccaggatgttttttgagactttggttcttaaa
acaagggactacattcatgttgaacaagagaattcatttgacaatatcaatataaagtct
agaggaaaactaatgaaagcaaacttttga
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