Telopea speciosissima (New South Wales waratah): 122654364
Help
Entry
122654364 CDS
T07910
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122654364
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122654364
Surveillance factors
Other surveillance factors
122654364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Asparaginase_2
Motif
Other DBs
NCBI-GeneID:
122654364
NCBI-ProteinID:
XP_043704364
LinkDB
All DBs
Position
3:2431111..2442527
Genome browser
AA seq
1700 aa
AA seq
DB search
MAEGKVDLPENLLSLKTGDEPWSSKEEVSGGNDEGKTLMGFLDESKDQAISESNIPLSPQ
WLYAKPSETKSGLSSASGEVRAQNSLPHGSSTDPIQKEGWRLDGSQDKKDWRRAATDIES
SRRWREEERETGLLVRRDRRKEDRRVDSTAEGRNLPSSDRWHDVNNRSSGHETRRDSKWS
SRWGPDDKEKESRAEKRMEVDKEDAHGDKQSFVGSNRAAPERETDSRDKWRPRHRLEIHS
GGSTVYRAAPGFGLERGRMEGSNVGFAPGRGRSNIIGSLSINRPPSAGPIGAPLDKNENV
HGRSGLSADMFCYPRGKLLDIYRKKKLVPYFDARLDGFDEVPSVTQESSVEPLAFVTPDA
EEQVVLNDIWKGKITSSGVIYNSSRDKMGISNENSAGVGILTLSESKQEMVLSIGTAESN
ECFASAAISDACRRNASEIAVFDERDSYIEKGENNVLVVRGGTQSDGLSVAVPKSNDVSN
AGGFGGAHHDAKSGENRQSENSAFPKHPSLGSIMSATTSFDISSKLPDDSSSLFDLPYVQ
PASSSHEQYLKSNGVGKLLERDAPPEEWSLYYRDPQGEIQGPFLGVDIISWFEQGFFGTD
LPVCLSDAPEGTPFRELGEIMPHLKTKVGPFSSSNAANQLEPFDATGGSVGSVIASAPAH
APVSAPVIVGSGGIDDQNWMTSEFEGLTGHNIHSVMSKRDNPMEPRYSEGQSFHDLVAED
EEVVFPGRPGSSSGNPIAKPSTNICDVLPNAASLPFLSNDLIENTMSNHQDSKLHPFGLL
WSELNGPHLRRTESSNMSSGVSDQSHLMNSLVGRDAPSASNKQSSFGAAVDSSLVGDTWS
DGYRRNTISNGNLHKDALDLHLSHLEQESNRFDLSEHLMSQQLQKQPLQPQNLLSHPALH
LNESVLEQVPGSGLSQIRNPIRYQQSAMPDLEHHLKLQLQQQRLFQLQQQQQQLQQQQQQ
QQQRQFQLQQQQQQQHQQQQQQQSQVRQLLLEQLLHHQMHDPGFAQSCVDPVRGNNMLDQ
ALYRQQFLHELQQHSQPLPRHLDPSLEQLIQTKFAQSQQRERREHHNDPFEFLSRAKHGQ
MLSLEQQLLLQQEQLPARQFSMASRQQTGMEEERHIGGAWSVDETGQFVRSTPSPHQVQS
AGFGPLDFYQRQQRPSSFEDQLSHHERNLAVQERMQRGLYEPDSLAFERSMSLPAGTPGM
NLDVNALSRAQGLDLQERLSHMHPGGQVGSFSSGVHSHHPQIANQFHASHSDAIESHWSE
RNGQAANSWRESRIQQLHLEAEHQKRELEFNVTSEDPGSWASAEINENNSKRLMLDLHQK
LGIHSNQSLEMGGGGLTSLEIREPSWLFSSSGSLDNRINFLADPQPGLQSGLNNSFVEGS
RGSNSGNTLQDRLLNASMDEQSSSLESSERLSIRSNSGALIEEEQFFPGINESSQSFYVD
SNITGKSSVDRDLSETKDGKKGKKRLSKTKVVTKSVSEVQESMDEQAVVASVDHSHSDVP
INAPIRHSLLGNAGGNVGRYNYEMGLDSTYGEEMAKDRVSSLLSRGMDNSLAKRPPVSRV
LSSHDTLSELASSPSLKGKIVMNIGPPDEGRRDSGGSLACQVSENPASGKKDVRFRRTSS
CSDADTSETSFIDMLKSSAKKPVLPESDTMAGASETSDGSQGSRSGKKKGKKGRQIDPAL
LGFKVSSNRIMMGEIQRLED
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaggcaaggttgatctaccggagaatcttctttcattgaaaacgggagatgag
ccttggagctctaaagaggaagtctcaggagggaatgatgagggaaagacacttatgggg
tttcttgatgagtcgaaagatcaagcaatatcagagagcaacatacctttgtctccccag
tggctctatgctaaaccaagcgagactaaatcagggctttctagtgcatctggggaggta
cgggcacaaaattctttgcctcatggaagctccacggatccaattcagaaagagggttgg
cgtttagatggatcccaggacaaaaaagattggaggagggctgcaactgatattgaaagc
agtcgccgttggcgtgaggaggagagagagactggcttactagttagaagagaccgcaga
aaagaagatcgtcgtgttgacagtactgctgagggtagaaatttgccttcctctgatcgg
tggcatgatgtaaataatcgtagttctggtcatgaaacacgacgagacagcaaatggtcc
tcaagatggggtccagatgacaaagagaaagaatctcgtgctgagaagaggatggaagtt
gacaaggaagatgctcatggtgacaagcaatcttttgttggcagcaatcgtgctgctcct
gagcgtgaaactgattctcgtgataaatggaggccacgacaccggcttgaaattcattca
ggtgggtcaactgtgtaccgtgctgcacccggatttgggctggagagaggaagaatggag
ggctcaaatgttggatttgctccaggacgagggagatcaaacatcataggaagcctgtca
attaataggcctccctctgcaggtcctattggtgctcctttagataagaatgaaaatgta
catgggagatctggcctctctgcagatatgttttgttacccaagggggaaacttcttgac
atttaccgtaagaaaaagcttgttccatattttgatgcacgactcgatgggttcgatgaa
gtaccatcagtaactcaggaaagctctgttgagcctttggcctttgttacacccgatgct
gaagaacaggttgtccttaatgatatttggaaaggaaaaatcaccagcagtggagttata
tataattcatctcgagacaagatggggatatcaaatgaaaattcggcaggtgttggaatt
ctgacattgtctgagagcaagcaagaaatggtcctttctattggcaccgccgagtccaat
gaatgctttgcaagtgctgcaatcagtgatgcttgtcggagaaatgcttcagaaattgct
gtttttgatgaaagagattcttatattgagaaaggtgaaaataatgttttggtggtgagg
ggtgggacacaatctgatggcttgagtgtggcagttccaaagagtaatgatgtttccaat
gctggaggatttggtggtgctcaccatgatgccaaaagtggtgaaaataggcaatcagaa
aattcagctttccccaagcaccctagtttaggaagcattatgtcagctactactagtttt
gatattagtagcaagcttcctgacgattcaagttctctgtttgatctgccttatgtccag
ccagcttctagtagtcatgaacagtacttaaagagcaacggtgtaggaaaacttttagaa
agggatgccccacctgaagaatggagtttgtactaccgtgatcctcaaggagagatccaa
ggaccatttctaggtgttgacatcatttcatggtttgagcaaggctttttcgggacagac
ttacctgtctgtctgtcagatgctccagaaggaacaccttttcgagaacttggggaaatc
atgccacatttgaagaccaaagttgggcccttttctagttctaatgcggctaatcagctt
gaaccttttgatgctaccggaggcagtgtgggctctgttatagcttctgctcctgcccat
gctcctgtctctgcccctgttattgtgggttcaggtggcatagatgaccagaactggatg
acttctgaatttgaaggtcttacaggtcacaatattcactcggtaatgtctaaacgtgat
aatccaatggaacctcgttattctgagggtcaaagctttcatgatttggttgcagaagat
gaggaagttgtttttcctggaaggcctggaagcagtagtggaaatcctatcgcaaagcct
tctactaacatttgtgatgtgttgccgaatgctgccagccttccttttctttcaaatgac
ttgatagaaaatacaatgtcaaatcaccaggacagcaagttgcatccttttggcttgtta
tggtctgagcttaatggtcctcatctgaggcgtacagagtcatcgaacatgtcttctgga
gtcagcgaccagagccaccttatgaattctcttgttggaagagatgcaccttctgccagt
aataagcagagctcatttggtgcagcggttgattcctctcttgttggggatacatggtcg
gatggctatagaagaaatacaatttcaaatggcaatttacataaagatgcactggatctc
cacctatcacacctggaacaagaatctaatcgttttgatctatctgagcacttgatgtct
caacagttgcaaaagcaaccactacagccgcaaaatcttttgtctcatcctgctttacac
ttgaatgaatcagttctggagcaggtaccaggttctggtctatctcagatcaggaatcct
attcgctaccaacagtcagcaatgcctgatttggagcatcatttaaagcttcaactccaa
cagcaacgactgtttcagctccaacagcagcagcagcaattgcaacagcaacaacaacaa
caacagcagcggcagtttcagcttcaacagcagcagcagcagcaacatcaacagcaacag
cagcaacaatctcaagttcgacagctgcttcttgaacagttgctgcatcatcaaatgcat
gatcctggctttgcacaatcatgtgtagatcctgtaaggggtaacaacatgcttgatcag
gctttgtacaggcagcagttcctgcacgaactgcaacaacattcccagcctcttcctagg
catcttgatccatctcttgagcaactcatccaaacaaaatttgcccagagtcaacagaga
gaacgtagagaacatcacaatgatccatttgagtttctatcgcgtgcaaagcatgggcaa
atgctttctttggagcaacaacttcttcttcagcaagagcagctgccggcaagacaattc
tctatggcttcaaggcagcagacagggatggaagaagagcggcacattggtggggcctgg
tccgtggatgaaactggtcagtttgttagaagcacaccaagtcctcatcaggttcagtct
gcgggttttggtccattggacttctaccagcgacagcagaggccttcctcctttgaggat
caactgagccatcatgaacggaatcttgcagtacaggaacggatgcagcgagggctttat
gagcccgactcacttgcatttgagaggtcaatgtctttgcctgctgggactcctggaatg
aacctggatgttaatgctttatctcgtgctcaaggattagacttacaggagcgactcagt
catatgcaccctggcggtcaagtgggttcattttcttctggtgttcactctcatcaccca
caaatagcaaaccagtttcatgcttcacattcagatgcaatagagagccactggtccgag
aggaatgggcaggcagcaaatagctggagagaatcccggatccagcaattgcatcttgaa
gcagagcatcagaaaagggagttagaatttaatgtgacctctgaagaccctggttcgtgg
gcatcagctgaaataaatgaaaataattcaaaacggttaatgttggatctgcatcagaaa
ctgggaattcattctaaccagtcattagaaatgggtggtggtggtcttacatcacttgaa
ataagagaaccctcttggctcttttctagctcaggctctttggataatcggatcaatttt
cttgcagacccacagcctggtctacagtctggtctgaacaattcttttgtggaggggtct
cgtgggtctaactcaggcaatactctccaggatcggttgttaaatgcaagcatggatgag
cagtctagtagtctggaaagcagtgaaagattgtccatcagatctaattcaggagctttg
attgaggaagagcagttttttcctggcataaacgagagttctcagtccttttatgtggac
tctaacattactggtaaatcatctgtagatagggacttatcagaaactaaggatgggaag
aaggggaagaagcgcttgtccaaaactaaggttgtaaccaagtcagtctcagaggttcaa
gaaagtatggatgagcaagcagtagtggcttctgtagatcattctcattcagatgtgcca
attaatgcccctatcaggcatagtctacttggtaatgctggtggaaatgtggggcgctac
aactatgagatgggactggacagcacatatggtgaagagatggctaaggacagggtatca
tctttgctatctagagggatggataactccttggcgaaacgtccacctgtctcacgtgtt
ttgtcatctcatgatacgctgtccgaactagcttcttccccatctttgaaagggaaaatt
gtgatgaatattggtcctcccgatgaggggaggcgagattctggagggagtctagcatgc
caggtttctgaaaatcctgcatctggtaagaaagatgtgcgttttcggcggacatcatct
tgcagcgatgcagatacatcagagacctcatttatagacatgcttaaaagcagtgctaag
aagcctgtgttgccagagtcagatacaatggctggagcatcagagacatccgacggcagt
caagggagccggagtggtaaaaagaaagggaagaaagggaggcaaattgaccctgctctc
cttggtttcaaggtctctagcaatcgaatcatgatgggtgagattcaacgtctcgaagat
tga
DBGET
integrated database retrieval system
