Telopea speciosissima (New South Wales waratah): 122654367
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Entry
122654367 CDS
T07910
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122654367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122654367
03009 Ribosome biogenesis [BR:
tss03009
]
122654367
04131 Membrane trafficking [BR:
tss04131
]
122654367
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tss04147
]
122654367
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122654367
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122654367
Membrane trafficking [BR:
tss04131
]
SNARE
SNARE associated proteins
Others
122654367
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122654367
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122654367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_28
AAA_17
nSTAND3
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
NACHT
AAA_7
NB-ARC
AAA_lid_PRS2_C
TsaE
AAA_24
DUF815
Zeta_toxin
KAP_NTPase
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
122654367
NCBI-ProteinID:
XP_043704368
LinkDB
All DBs
Position
3:complement(35388894..35394039)
Genome browser
AA seq
806 aa
AA seq
DB search
MTNRAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVTLNPETMEKLQLFRGD
TILIKGKKRRDTICIALADDSCDEPKIKMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH
ILPVDDTIEGVTGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPSEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHIIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNVSW
NDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRYNI
FKANLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSDN
PEAMEEDVEDEVAEITPAHFEEAMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAD
SGSAATGAADPFAASTGAAEEDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccgagctgaatcgtctgactcgaagggaacgaagagggatttcagtactgca
attcttgaacggaagaaagctgccaatcgtcttgtcgtcgacgaggcgatcaatgacgac
aattcggtggtaacattgaatccagaaacgatggagaagctgcagcttttccgtggtgat
accatcttgattaagggcaagaaaaggagggatactatctgcattgcccttgctgatgat
tcatgtgatgaaccgaagatcaagatgaataaagttgtcagatcaaatctgagggttagg
cttggtgatgttatttctgttcaccaatgcccagatgtcaaatatggaaagcgtgtccac
atactgcctgtggatgatacaattgaaggcgtcactgggaatatatttgatgcctatttg
aaaccatatttcttggaagcatatcgtcctgttaggaaaggggatctcttccttgttaga
ggtggaatgaggagcattgagtttaaggtcattgagactgacccatccgagtactgtgtt
gttgctcctgacactgagatattttgtgagggggagccagttagaagggaggatgaagac
aggttggatgaagtgggttatgatgatgtcggtggtgtgaggaaacagatggctcagata
cgagaacttgtggaacttcctctaagacatccacagctgttcaaatctattggtgtgaag
cccccgaaaggaattttgttgtatggtcctccaggttctgggaagactttgatagccagg
gctgttgccaatgagactggtgccttcttcttctgtattaatggtccagaaattatgtct
aaattagctggagagagtgaaagcaatctcaggaaggcatttgaggaagcagagaagaat
gcaccatctatcatcttcattgatgaacttgattctatagcacctaagcgagagaagaca
catggagaagttgaaaggcgtattgtttctcagctcctgacgctgatggatggtttgaaa
tctcgtgcccatattattgttattggggctacaaaccggcctaacagcattgacccggct
ttgagaaggtttggtaggtttgatagggaaattgatattggtgttccagatgaagttgga
cgtcttgaggttcttcgcattcatacaaagaacatgaaattagctgaagatgttgacttg
gagagaatagcaaaagacactcatgggtacgttggcgctgatcttgctgctctctgtact
gaagctgcccttcagtgcatcagagaaaagatggatgtcatcgacttagaagatgaatcc
attgatgctgagatactgaactctatggctgtcacaaatgaacacttcaaaactgctctt
ggaacaagcaatccctctgcccttcgtgagactgttgttgaagtgcctaatgtcagctgg
aatgacattggtgggcttgaaaatgtcaagagggagcttcaagagactgttcaatatcct
gtggagcaccctgaaaagttcgagaagtttggtatgtcaccctcaaaaggagttcttttc
tacggtcctcctggttgtggtaaaactttattagccaaggcgattgcgaatgaatgccag
gctaatttcattagtgttaagggtcctgagttgctcactatgtggtttggggagagtgag
gccaacgtgcgagaaatctttgacaaggcccgtcaatctgcaccttgtgtccttttcttt
gatgagcttgattcaattgctacacagagagggagtagtgttggagatgctggtggtgca
gctgatagggtcctgaaccagctcctgactgaaatggatggcatgaatgctaagaagacg
gttttcattattggtgccaccaacaggcctgacataattgaccctgctttgctgaggcca
ggccgtcttgatcagttgatttacattcctctgccagatgaggactcccgctataatatt
tttaaggccaacctgaggaaatcacctgtttcaaaggatgttgacctgagggctcttgca
aaatatactcaaggctttagtggggctgatattacagagatatgccaacgtgcttgcaaa
tatgccattcgagaaaatattgagaaagacattgaaagggagcgaaggagaagtgacaat
cccgaggcaatggaggaggatgttgaggatgaagtagctgagatcacacctgcacacttc
gaggaagcaatgaagtatgcacgcaggagtgtgagcgatgctgatatccggaagtaccag
gcatttgcacagacattgcagcagtcaagggggtttggaagtgagttcagatttgcagat
tctggatctgcagctacaggagctgctgacccatttgcggcatcaactggtgcggccgag
gaagatgatctctacggttaa
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