KEGG   Telopea speciosissima (New South Wales waratah): 122654388
Entry
122654388         CDS       T07910                                 
Name
(RefSeq) protein pleiotropic regulatory locus 1
  KO
K12862  pleiotropic regulator 1
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122654388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122654388
   03400 DNA repair and recombination proteins [BR:tss03400]
    122654388
Spliceosome [BR:tss03041]
 Complex B
  Other components
   Prp19 complex
    122654388
 Complex C
   Prp19-CDC5 complex
    122654388
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122654388
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 CFAP251_N ASA1 Beta-prop_RIG_2nd Beta-prop_Aladin PAC11 Beta-prop_IFT140_1st TRM82_WD Beta-prop_ACSF4 Beta-prop_DCAF12 WDR90_beta-prop_4th DNAI3_WD Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_WDR11_2nd WDR54
Other DBs
NCBI-GeneID: 122654388
NCBI-ProteinID: XP_043704390
LinkDB
Position
3:59156302..59202293
AA seq 485 aa
MPGPTLDMEPVEPQSLKKLSFKSLKRALDLFSPIHGQYAPSDLESKKIRISYKMHAEYGA
VRNLPTQPASQVSSTRQDQASGTSEILALPGTENSKDMQKGGDQNALVVGPSVQPIKLND
ASLSDKSVAGALASLPGSSERNPSTSALMERIPSKWPRPVWHAPWKNYRVISGHLGWVRS
IAFDPSNTWFCTGSADRTIKIWDVASGRLKLTLTGHIEQIRGLAVSKTHTYMFSAGDDKQ
VKCWDLEQNKVIRSYHGHLSGVYCLALHPTIDILLTGGRDSVCRVWDIRSKMQIHALSGH
DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMATLTHHKKSVRAMAQHPKEHAFAS
ASADNIKKFSLPKGEFLHNMLSQQKTIINAMTVNEEGVMVTGGDNGSLWFWDWKSGHNFQ
QSQTIVQPGSLDSEAGIYALSYDLTGSRLVTCEADKTIKMWKEDENATPETHPLNFKPPK
EFRRF
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgccaggcccaacattagatatggagccagtagagccgcagtctctcaagaagctaagc
ttcaagtccctgaaaagagctctcgacctcttctctcctatccatggccaatacgcgccc
tctgatcttgaaagcaagaagatacggatcagctacaagatgcatgctgaatatggagca
gtcagaaacttgccaacccagccggctagtcaagttagttcaactcgacaagatcaagct
tctggaacttctgaaatactggcccttccaggaactgaaaattctaaagatatgcagaaa
ggaggtgatcaaaatgctttagttgttggtccatcagtgcaaccaataaaactaaatgat
gcgagtctttcagataaaagtgttgctggggcacttgcttctcttcctggttcatcggaa
agaaatccatcaacttctgctctaatggaaaggattccaagcaaatggccacgtcctgta
tggcatgctccatggaagaactacagggtcatcagtggccatttgggatgggtcagatcc
attgcatttgatcctagcaatacatggttttgtaccggttccgcagaccgtacaataaag
atatgggatgtggcaagtggaaggctaaagctcacattaacaggacacatcgaacagata
cgtggccttgcagtgagcaaaactcatacctacatgttttctgcgggtgatgacaaacaa
gtaaaatgttgggatcttgaacagaacaaggttatccggtcatatcatgggcatctaagc
ggtgtttactgcttggctcttcatcccaccattgacattttgcttactggaggacgtgat
tctgtctgccgggtatgggatattcgtagtaagatgcagattcacgctctctctggacat
gataacacagtttgctcagtttttactagacctacggatccacaagttgtaactggctcc
catgacactaccattaagttctgggaccttcgttatggaaaaacaatggcaactcttaca
caccataagaagtctgttcgagcaatggcacaacatcctaaagaacatgcttttgcatct
gcttcagctgacaacataaagaaattcagccttcctaaaggagagtttttgcacaacatg
ctctcccaacagaaaacaatcataaatgcaatgacggtcaatgaagagggtgtgatggtg
acaggaggtgacaatgggagcttgtggttttgggattggaagagtgggcataactttcag
caatctcaaaccattgtgcagcctgggtccctggatagtgaagctggcatatatgcgctc
tcttatgacttaactggttcacggctagttacttgtgaggcagacaaaaccattaagatg
tggaaagaagatgagaatgccactccagaaactcatccgctcaacttcaagcctccaaag
gaattccggcgattctaa

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