Telopea speciosissima (New South Wales waratah): 122654426
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Entry
122654426 CDS
T07910
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
tss04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122654426
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122654426
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122654426
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122654426
03036 Chromosome and associated proteins [BR:
tss03036
]
122654426
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122654426
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122654426
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122654426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
122654426
NCBI-ProteinID:
XP_043704440
LinkDB
All DBs
Position
3:complement(6778200..6788160)
Genome browser
AA seq
503 aa
AA seq
DB search
MSRGSPTTLEWKFSQVFGERAPGEDAQDVDIISAMDFDKSGDYLAAGDRGGRVVIFERTD
VNDLRSRKELEHLDYGPKVRPEYRYKTEFQSHEPEFDYLKSVEIEEKVNNVRWSVTLNGS
QCILSSNDKTIKLWKLKERKVKKVKEMDLNPFVRSENALLAEKSFLAGQQIPSVTNGNLL
EWTNDIPNNTFPSSEGGVTKISSIGEAALARCRRVYAYAHDYNINSISNNSDCETFVSAD
DLRINLWNLEISDQCFNIIDMKPANMENLIEVITSAEFHPVYCNLLAYSSSRGFIRLVDM
RQSALCDQHARIFQDREPHGSTTFFTEIITSISDIKFASDGRHILSRDYMNLKLWDLHME
ASPVATFKIHEYLRPKLSDLYNNDSIFDKFECCLSGDGLHFATGTYSNLFRVFSPRDGNE
EGTTLEASKNPYRKQHHQATSRARRTSLSNHTRGHFRQGHNYSSSEINGVPCDLASKLLH
LAWHPSASLIACAVANSLYMYYA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaggctctcccactacgttggagtggaaattttctcaggtcttcggagaacgg
gcaccgggggaggatgctcaagatgtcgacatcatatctgcgatggactttgacaagagc
ggggattaccttgccgctggagatcgaggtggtcgtgttgtgatttttgagaggacggac
gtgaatgacttaaggtctcggaaagagttggagcacttggattatggtcccaaggttcgt
cctgaatatcgttacaagactgaattccagagtcatgaaccagagtttgattatctgaag
agtgtggaaattgaagagaaagtcaacaacgtaaggtggtctgtgacactaaatggttca
cagtgtattctctcatcgaatgataagacaattaagctatggaagcttaaggaacggaaa
gtaaagaaagtcaaagaaatggacctgaatccatttgtgcgttcagaaaatgcacttctc
gctgagaagagtttcctggctgggcagcagataccatctgttactaatggcaaccttctg
gagtggacaaacgacataccaaacaacacattcccatcgtctgaaggaggggttaccaag
atatctagcattggagaggctgctcttgcaagatgccggagggtttatgcttatgctcat
gattataatattaattctatctcaaacaacagtgattgtgagacatttgtttctgcggat
gaccttaggataaatttgtggaacctagagattagtgatcagtgtttcaatatcattgac
atgaaaccagccaacatggagaacctcattgaggttataacatcagctgagttccatcca
gtttactgtaatctcctagcatatagcagctcaaggggttttattcgtctggttgacatg
cggcagtcagcattgtgtgatcaacatgctaggatatttcaagaccgtgaacctcatgga
tctactacattttttactgagataatcacatctatctctgatataaagtttgcgagcgat
ggaaggcatatcttaagtcgtgattatatgaatctaaagctgtgggacttgcatatggag
gcttctccagttgcaacttttaagattcatgagtaccttcgccctaagttgtctgattta
tataataatgattcaatttttgacaaatttgagtgctgcctcagtggggatgggcttcat
tttgctactggaacttatagcaatctttttcgggttttctctcctcgggatggaaatgaa
gaaggaaccacactagaagctagcaaaaatccttaccggaagcaacatcaccaagccact
tctagagctagacgcacatctctaagcaaccacacccgtgggcatttccgacaaggacat
aattattcaagctccgaaattaatggggttccttgtgacttagcttccaagctgctacat
ctggcatggcatccatcagctagtttaattgcctgtgctgttgcgaatagcttgtacatg
tactatgcataa
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