Telopea speciosissima (New South Wales waratah): 122654428
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Entry
122654428 CDS
T07910
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122654428
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tss01007
]
122654428
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122654428
03029 Mitochondrial biogenesis [BR:
tss03029
]
122654428
Enzymes [BR:
tss01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
122654428
Amino acid related enzymes [BR:
tss01007
]
Aminoacyl-tRNA synthetase
Class I (A)
122654428
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122654428
Prokaryotic type
122654428
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122654428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
122654428
NCBI-ProteinID:
XP_043704445
LinkDB
All DBs
Position
3:62705532..62712499
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AA seq
388 aa
AA seq
DB search
MAEEEKISQNMQSLSVNSASQEPSSSDSNQETGMTLEERFQIIRSIGEECIQEDELLNLL
AKKPGIICYDGFEPSGRMHIAQGVMKAINVNKLTSAGCKVKIWVADWFAQLNNKMGGDMK
KIRTVGDYLIEIWKSVGMDLEGDKVEFLWSSKEINARADEYWPLVMDIARRNKLPRILSP
ICRCSQIMGRNEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNMLAREYCDDIK
RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEVAEVNLKIKKAYCPPMVVEGNPC
LEYIKYIILPWFGEFTVERDAANGGGKTFKSYEEIATDYEKGELHPADLKPALSKSLNKI
LQPVRDHFANDATARDLLKKVKSYRVSR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagagaaaatatctcagaacatgcagtccctgtcggtgaattcagcttct
caagagccatcttcaagcgattcgaatcaagagactgggatgacattagaggagagattt
cagattataaggagtattggagaagaatgtatacaagaggatgagttgttgaatctgctc
gccaagaagccaggaattatttgctatgatggctttgaaccctctgggagaatgcacatt
gctcagggggttatgaaggcaataaatgtgaacaaactaacatctgctggatgcaaagta
aagatatgggttgcagattggtttgcacagctaaacaacaaaatgggaggcgatatgaag
aaaattagaactgttggagattacttgattgagatttggaaatctgtgggaatggatctc
gaaggagataaggtggaatttttgtggtcttcaaaagaaattaatgcacgggcagatgag
tactggcctcttgtgatggatatagctcggaggaacaagcttccaaggatattaagcccc
atttgcaggtgttctcaaattatgggtcgtaatgagcaggatgaattgacagctgcacag
attttttatccatgcatgcagtgtgccgacatattcttcctgaaggctgacatctgccag
ctgggcatggatcagcggaaggtaaacatgcttgccagagaatattgtgatgacatcaaa
aggaagaacaagcctatcatcttgtcacaccacatgctgcctggtttgcaacaagggcaa
gagaagatgtccaaaagtgatccatcatcttcaatctatatggaggatgaagtggcagaa
gtcaatctgaagataaaaaaagcttactgccccccgatggtcgttgaaggaaatccttgt
ttagagtacattaagtacataatcttaccatggtttggtgagttcacagtagagcgagat
gcagcaaatggtgggggcaagaccttcaaaagctatgaagaaattgctactgactacgaa
aaaggagaactacatccagcagacctcaaacctgctctatcaaagtctttaaataagatt
ttgcagcctgtgagagatcattttgcaaatgatgctactgccagggatctactgaaaaaa
gttaaatcttacagagtaagcaggtga
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