Telopea speciosissima (New South Wales waratah): 122654868
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Entry
122654868 CDS
T07910
Name
(RefSeq) probable pectate lyase 7
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122654868
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122654868
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122654868
NCBI-ProteinID:
XP_043705070
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Position
3:complement(13381252..13382741)
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AA seq
409 aa
AA seq
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MVELAIIKPNNIFFFFFFFFLFTYAVKAHIATNFEGALTRRLLLQQKEEVGAGGPCQATN
PIDSCWRCQANWEMNRKSYAKCALGFGRKTRGGENGRIYVVTDPSDSDMVNPKNGTLRYG
VIQNEPLWIIFAHDMTIRLTQELIMTSNKTIDGRGANVHIANGAGITIQFVHDIIITNLH
IHDIKATKGGDIRDSVDHHGQRTSSDGDGINIFGSTNIWIDHMSMSNCKDGLIDAVMGST
AITISNNYFSSHDHVMLLGANDTYADDEKMQVTVAFNHFGPGLVQRMPRVRWGFAHVVNN
DYTHWEMYAIGGSTHPTILSQGNRFVASDSSAFKQVTHRDYATEDVWKNWDWRSEGDLME
NGAFFVQSGSPLKKESFSSEDMISPKPATSVPELTRFAGALNCTVGKPC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtggagttagctattattaagcccaacaacatcttctttttctttttcttcttcttt
ttgttcacctatgctgtgaaggcccatatagcaacgaacttcgaaggggcgttgacgaga
aggttgttgcttcaacagaaagaagaagtgggggccgggggcccatgccaggcaacgaac
ccaatagacagctgctggaggtgccaagccaactgggagatgaatcgaaagagttacgcc
aagtgcgcgctggggttcggcaggaagactaggggtggcgagaacggccgcatctacgtt
gtcactgacccctccgacagcgacatggtcaacccaaagaacggcaccctccgttacggt
gtcatccagaacgagccactttggatcatctttgcccacgacatgaccatccgcctcacc
caggagctcattatgacatccaacaagaccatcgacggccgtggcgccaacgttcacatc
gccaacggcgctggtataaccatccagttcgtccacgatatcatcatcactaacctccac
atccacgacatcaaagccaccaaaggcggcgatatccgtgattccgtcgaccaccacggt
cagcgcacctccagcgacggcgatggtattaacatcttcggatccaccaacatctggatc
gaccacatgtccatgtccaactgcaaggatggactcatcgacgccgtcatgggttccacc
gccattaccatctccaataactacttctctagccacgaccatgtgatgctgttaggagca
aatgacacctacgccgatgacgagaagatgcaggtcaccgtagcattcaaccacttcggg
ccaggattagtacagaggatgcccagggtccgatggggattcgcccacgtggtgaacaac
gattacacccactgggaaatgtacgccattggtggcagcacacacccaaccatcctaagt
cagggcaaccgcttcgtcgcttcagattcatcggcattcaagcaggttacccatagggat
tacgcaaccgaggacgtgtggaagaactgggactggagatctgagggtgatctaatggag
aacggtgccttcttcgtccaatctggatccccattaaagaaggagtccttctccagcgaa
gacatgatcagcccaaagcccgccacctctgtccccgagcttactcgctttgctggtgca
ctcaactgcacggttggcaagccttgctaa
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