Telopea speciosissima (New South Wales waratah): 122655494
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Entry
122655494 CDS
T07910
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122655494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122655494
03036 Chromosome and associated proteins [BR:
tss03036
]
122655494
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122655494
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122655494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122655494
NCBI-ProteinID:
XP_043705618
LinkDB
All DBs
Position
3:complement(71342248..71357825)
Genome browser
AA seq
680 aa
AA seq
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MDQFQRRECTYNRDEGEELDHDIEKSSKMTFGGSSSTPWNFTSSSSSTATTTTSPAGDFS
RLALGASSSTPAFEIGYRPSSSPWSMPGSFMTGQEKPISEGLNKFKWSPVPFGNPFQKTR
ETSGNNTFGSTGTAPLLSSTAPAFGSPVPSFCGSFRICLKCVTCGGFDWVPQITESAFEI
SNPFGSKQPFGGSPQPAFAVSNKPGFGTTNTTTTTSSPITFTFGSTGTAPLLSNAPAFGS
PTPSFCGSFRICLKCATCGGFDWVPQITTQSAFEGSTPQPAFVVSNKPVFGSRDVGQIST
VRLRNFCRDNMSQANDIGNSTNMPFGSSSTPASNFTSPAGDFSRLAALGASSSSSTPASA
FEIGCSPPSSSSSMPGSFMTGQKKPISQETSGNNIFGLKPSSAEFRKWINAVEKDHRPGI
LFQTTPTLFGSTETAPFLSSAPAFGSPAHSFCGSFRICLKCATCGGFDWVPQITTQSAFE
TRTPFGSTQPFGGSPQPTFVVSNKPVFGTTTTTTTTTSSPTTFGITTKTPTFSSTGTNPF
LSNAPAFGGSAPSFCGSFRIYLKCATCGGFDWVPQITQSAFEKSTPFGSTQPLGGSPQTC
PLAGGGSRVAPYTPAFVANSLNGIRSLGKVMSISAMPTYQDRSHEELRWEDYQLQDKGGP
RTASPSLYAGSTTYARRFSL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtttcagagaagggaatgcacttataacagggacgaaggagaagaactggat
catgacattgagaagtcgtcaaaaatgacattcggcggatcctcttctacgccttggaac
ttcacatcatcatcatcatcaacagcaacaacaacaacctcaccggcaggagatttttca
aggcttgctttgggggcttcttcttcaacacctgcttttgaaataggctaccgcccatca
tcatctccctggtcaatgccaggatcttttatgactggacaagagaagcctatttcagaa
ggcttaaataagttcaagtggagtcctgttccatttggaaacccattccagaaaacaaga
gaaacatctgggaacaacacatttggtagtacaggaacagccccacttctatctagtact
gcaccagcttttggcagtcctgtaccctcattttgtggatcctttagaatttgtctgaag
tgtgttacttgtggaggttttgattgggttcctcagataacagaatcagcattcgagata
agtaatccatttggttcaaaacaaccctttggtggatcacctcagcctgcgtttgctgtt
tctaacaagcctggttttggtactactaatactactactactacaagcagcccaataact
ttcacatttggtagtacaggaacagccccattactgtctaatgcaccagcttttggcagc
cctacaccctcattttgtggatcttttagaatttgtctgaagtgtgctacttgtggaggt
tttgattgggttcctcagataacaacacaatcagcattcgagggaagtactccccagcct
gcgtttgttgtttctaataagccggtttttggatcaagagatgtaggtcaaatctcaact
gttagattgcgtaacttctgtagggacaacatgagccaagcaaatgacattgggaattca
acaaatatgccattcgggtcctcttctacgccagcttccaacttcacatcaccggcagga
gatttttcaaggcttgctgctttgggggcttcttcttcttcttcaacgcctgcttctgct
tttgagattggctgcagccccccatcatcatcctcgtcaatgccaggatcttttatgact
ggacagaagaagcctatttcacaagaaacatcggggaacaacatatttggtttaaaacca
tcctctgctgaatttaggaaatggattaatgctgttgagaaagaccaccgccctggaatt
ttgtttcaaacaactccaacattatttggtagtacagaaacagccccatttctgtctagt
gcaccagcttttggaagccctgcacactcattttgtggatccttcagaatttgtctgaag
tgtgctacttgtggaggttttgattgggttcctcagataacaacacaatcagcattcgag
acacgaactccatttggttcaacacaaccctttggtggatcacctcagcctacatttgtt
gtttctaataagccggtttttggtactactactactactactactactacaagcagccca
acaacttttgggattacaacaaaaactccaacatttagtagtacaggaacaaacccattt
ctgtctaatgcaccagcttttggaggctctgcaccctcattttgtggatcatttagaatt
tatctcaagtgtgctacttgtggaggttttgattgggttcctcagataacacaatcagca
tttgagaaaagtactccatttggttcaacacaacccttaggtggatcacctcagacttgt
cctttagcaggtggagggagtagagttgcaccttacactcctgcatttgtggcgaatagt
ttaaatggcatacggtctcttggtaaggtaatgtcaatatcggctatgcctacttaccaa
gatagaagccatgaagaactcaggtgggaggactatcagttacaggataaaggtggtccc
cgtactgcttctccatctctatatgctggatcaacaacatatgcaagacggttctctttg
tga
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