Telopea speciosissima (New South Wales waratah): 122655612
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Entry
122655612 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122655612
04121 Ubiquitin system [BR:
tss04121
]
122655612
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122655612
Membrane trafficking [BR:
tss04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122655612
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122655612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
DUF7685
Prok-RING_1
zf-RING_16
FAR1_N
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122655612
NCBI-ProteinID:
XP_043705787
LinkDB
All DBs
Position
3:19726971..19730129
Genome browser
AA seq
330 aa
AA seq
DB search
MNETPPPPPPNNYRPYWCYQCQQIVRVASGGNPSDLVCPRCFGQFLQEQDTVRPRLVFNI
PGLDNDSGSRLLEALSLMLDPPTLPPQPPEPYPPVLGSRDGRRVPVPVPGNGIAARPRLP
QSWIIFRPTNRGGDDGGGRLPRIIFPPENRLPLLLNSDPRNYFIGPGLNDLIEELTQNDR
PGPPPAPASAIEALPTVKVQPHHLKDDSLCPVCKEEFKVGEEARLMPCTHVYHSDCIVPW
LRIHNSCPVCRHELLLPAPPDNERNVNADDSDEHDRRNRRRCWRWSQLSSLWPFRSPNLR
YHPHVNNSQDDTILATRRAANSWWRSWFLR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaactcctcctcctcctcctccgaataactaccgtccctactggtgttaccaa
tgccaacaaatagtccgagttgcttctggaggaaacccatctgatttagtttgtcctcgt
tgtttcggccaatttctccaagaacaagacacagtgagacctagacttgtttttaacatc
ccaggtcttgataatgactctggttctcggttgttagaagctctgtctctcatgcttgac
cccccaacccttccgccgcagccgccagagccatatcctcctgttcttggttcaagagat
gggaggagggttccggtaccagtaccggggaatggaattgcagcccgtcctcgtcttcct
cagtcatggattatcttccgtcccactaaccgtggtggtgatgatggtggtggtcgcctt
cccagaatcattttccctccagaaaatcgtttgccccttttgctgaactctgatcccaga
aattatttcattggacctgggttgaatgacctaattgaagagcttacacagaatgatcga
ccaggcccgcctccagctcctgcttcagcaattgaagcattaccaacagtaaaggttcaa
ccacatcatctaaaagatgattctctttgtccagtttgcaaagaggaatttaaagtcggc
gaggaagctagactgatgccctgtacccatgtctaccattctgattgcattgttccctgg
ttgaggattcacaattcttgccctgtttgtcgccatgagcttcttcttccggctccacct
gacaatgaacgtaatgttaatgctgatgattctgatgagcacgatagaaggaatcggcgg
cgctgctggaggtggagtcagctatcctctctatggcctttcagatcaccaaatttgagg
tatcatccacatgttaataattctcaggatgacaccattcttgctactcgtagagcagct
aactcctggtggcgctcctggtttcttcgctaa
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