Telopea speciosissima (New South Wales waratah): 122655635
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Entry
122655635 CDS
T07910
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03030
DNA replication
tss03420
Nucleotide excision repair
tss03430
Mismatch repair
tss03440
Homologous recombination
tss03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122655635
03420 Nucleotide excision repair
122655635
03430 Mismatch repair
122655635
03440 Homologous recombination
122655635
03460 Fanconi anemia pathway
122655635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tss03000
]
122655635
03032 DNA replication proteins [BR:
tss03032
]
122655635
03400 DNA repair and recombination proteins [BR:
tss03400
]
122655635
Transcription factors [BR:
tss03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122655635
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122655635
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122655635
MMR (mismatch excision repair)
122655635
DSBR (double strand breaks repair)
HR (homologous recombination)
122655635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
RADX
TMEM219
DUF223
Motif
Other DBs
NCBI-GeneID:
122655635
NCBI-ProteinID:
XP_043705821
LinkDB
All DBs
Position
3:28621682..28624736
Genome browser
AA seq
622 aa
AA seq
DB search
MPVHLTPNAIAAVNAGDVNSKPLVQVLDINLIGNSKDRYRFLLSDSVSTQHAMLATQLND
RVKNGSVKKGSVVQLIEYICSTIQNRKIIVVLNMETIIPDCEIIGKPKLLSESISTFSKT
VHEKESEHRESKSNNSSTPSSSSNMQNFGPTVQPPYKPPPNYRNHGPIMKNVAPARTIPI
AALNPYQGRWAIKARVTAKGDVRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVADRFF
SSVEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVELCVDEDDSIPKQQFSFKAI
NEIENLENNSIIDVIGIVVSINPVVPILRKNGLETQRRNMNLKDASGCSVELTLWGEFCN
KEGRELQELLDSGLFPVLAVKAVKVNDFSGKSVGTISATQLFINPDFPETRRLQEWFDRG
GKNAASQSISRDIMTGASRNMIRKAVSQIKGEGLGRSDKPDWITVKATITFLKTDTFCYT
ACPLMIGDRQCNKKVIRSGNTRWQCERCNQEFEECEYRYLLQAQVQDHTGLTWVTAFQES
GEEILGCSAKELYLLKYEEQDDEKFGEIIRNSLFKQYLFRLKIKEEMYGEEQQVKITVVK
AEKLNYSSESTYLLDLISKITV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacatctcacgcctaacgcaatcgcggctgtcaatgctggcgatgtgaactca
aagccccttgtccaggtcttggacatcaatcttataggcaattcaaaggatcgttatcga
tttctcctctccgactctgtttccactcaacatgctatgctggcaactcagctgaacgat
cgggtgaagaacgggagtgtgaagaaggggtccgttgtgcaattgattgagtatatctgc
agcactatccaaaaccggaagattattgtcgtactgaatatggaaactataatcccggat
tgtgagattattgggaaaccaaaactgttgtcagaatctatctctacattttcgaaaact
gtgcacgagaaggaatctgagcaccgtgaatccaaatccaataatagttctactccaagt
tccagcagtaatatgcagaactttggtccgactgttcagcctccttacaaacctcctcca
aactatagaaatcatgggccaattatgaagaatgtggctccagcacgaacaatcccaatt
gctgctttgaatccttatcaggggcggtgggcaattaaggctagagttactgcaaaagga
gatgttcgccgttacaacaatgctaggggagatgggaaggtgttttcctttgacctcctt
gactctgatggaggagaaataagagtgacttgtttcaatgctgttgccgaccgcttcttc
agttctgttgaggttggtaaagtctacttgatatcgaagggaagcttaaaacctgctcag
aagaatttcaatcatcttaagaatgaatgggaaatattcttggaggcaacctcgactgtg
gaactctgtgtagatgaagatgactccataccaaaacaacagttctctttcaaagctatt
aatgaaattgagaatttggaaaacaattccataatagatgtgattgggatagtagtatcc
attaatcctgtagtccctattctgaggaagaatggtttggaaactcagagaaggaatatg
aacctaaaggatgcatctggctgtagcgttgaactaaccctctggggtgagttctgcaac
aaagaaggtcgggagctgcaagaattgctcgattctggtctttttcctgtcttagctgtt
aaggctgttaaggtgaatgatttcagtgggaaatcagttgggacgatctctgcaactcag
ctctttataaatccagacttccctgagactcgtaggttgcaagagtggtttgatagagga
ggaaagaatgctgcttctcagtccatctctagagacattatgacaggtgcttcaagaaat
atgatccgtaaagcagtaagtcagataaaaggtgaaggtcttggaagatcagataaacca
gattggatcacggtgaaggcaactataacattcctcaagacagatactttctgctacact
gcttgccctttgatgattggagacagacagtgtaacaagaaagtgataaggtcgggaaac
acgagatggcaatgtgagaggtgcaaccaagagtttgaagagtgtgagtacagatacctt
cttcaagctcaagtgcaagatcatacaggattaacttgggtgacagcttttcaggaatca
ggggaagagatcttgggttgttcagcaaaggagttatatttgttgaaatatgaagagcaa
gatgatgaaaaattcggagaaattatccgcaatagcctctttaaacagtatcttttcagg
cttaagatcaaagaagaaatgtatggggaggagcaacaagtgaagatcacagtggttaag
gcagagaaattgaactactcttcggagagtacatatctacttgatttgatttcaaagatt
acagtataa
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