Telopea speciosissima (New South Wales waratah): 122655637
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Entry
122655637 CDS
T07910
Name
(RefSeq) DNA-directed RNA polymerase 3, chloroplastic-like isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tss03029
]
122655637
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122655637
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
122655637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
122655637
NCBI-ProteinID:
XP_043705823
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Position
3:complement(24253118..24297281)
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AA seq
1010 aa
AA seq
DB search
MASTATTFFASSPRVRVHNTWRRHRRKHMNSQKNLFFLLNSSSNIPFRGLKLGEPLSSFL
FPTGFQLPIFNPVFLTKSSHLRSIQFPTLSDSIDDNLIGNLEDAISLQRFTNGVHQILPE
ESVGRIFYDDPPWISSILSATQLKGLEERVKGGEKQRSYSHGMEKSKYNALRRRQIKEET
EAWERAAAEYRELERVMCEKKLAPNLPYVKFLFLGWFEPLREAIAKEQRLQGTKRQKAAY
APHIDLLPADKMAVIVMHKVMALMMVTPEEGCVRVVQASVHIGEAIEQEVRIHRFLERTK
KCKTGKMIESHKHEDVSTELEIIRQRVKRLMKKKRLLEVQKLVKSEDDIKSWGRDAQAKL
GSRLIELLTETAFVQPPVSQLPDGPPEIRPAFRHRFKTLMKEPGQSVGKRYGVIECDPLV
LKGLDRTARHMAIPYMPMLIPPKKWKGYDKGGHLFLPSYVMRTHGAKQQQDAVRNVSRKQ
MQKVFEHIQALDTLGNTRWRVNKRILDVVESLWAKGGNIGGLVDREDIPIPEKPNSDDLS
VIQKWKWSMRKAKKINRELHSQRCDTELKLAVARKMKNDEGFYYPHNLDFRGRAYPMHSH
LNHLSSDLCRGVLEFSEGRPLGKSGLHWLKIHLGNLYGGGVEKLSYDGRIAFVENHLDDI
FDSADKPVEGNHWWLNAEDPFQCLAACVNLSEALKSSSPQTVISHLPIHQDGSCNGLQHY
AALGRDSLEAAAVNLVAQERPADVYSEIASRVFDIMKMDSERDPATNRTALLAKVLIDQV
DRKLVKQTVMTSVYGVTYVGAREQIKRRLQEKGHITDDRLLFSASCYAAKVTLTALGEMF
QAARAIMGWLADCAKVIASENQPVRWTTPLGLPVVQPYHKTERHLIRTSLQVLALQREGD
MVDAKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLHFVGVHDSFWTHACDVDKMNQILR
EKFVELYSMPVLEKLLESFQTSYPTLSFPPLPDTGNFDLREVLKSPYFFN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacggccacaaccttcttcgcttctagccctcgagttcgagtccacaataca
tggagaagacaccgaagaaaacacatgaactctcagaaaaacttgtttttcctcctcaat
tcaagctcaaacattccatttcgcggtttgaaactcggtgaacccttatcttctttcctt
tttccaactgggtttcaattgcctatattcaatccagtcttccttaccaagtcttctcac
ttacgttctatccagttccccacgttatcagactcaatagacgataatctcattggaaac
cttgaagatgccattagtttgcagagattcacaaatggagttcaccaaattctgccagaa
gaatccgtcgggaggatcttttatgacgacccaccttggatttcttccattttgtcggct
actcagttgaagggtcttgaggagagagttaaaggtggtgagaaacaacgttcatattct
catgggatggagaaaagcaaatataatgcgcttcggagaaggcagattaaggaggagact
gaagcgtgggagagggctgcagctgagtacagggagttggagagggtgatgtgtgagaag
aaattggctcctaatttaccttatgtgaagttcctgtttttgggttggtttgagcctctc
agggaggcaattgctaaagaacagaggttgcagggtacgaaaaggcagaaggctgcttat
gctcctcacattgatttattgccggctgacaagatggctgttattgtcatgcataaagtc
atggctctgatgatggtgacaccggaagaagggtgtgttcgggttgttcaagcctctgtt
catataggagaggccattgagcaggaggtgaggattcatagatttttggagcgaactaag
aaatgcaagactggtaagatgattgaaagtcataagcatgaggatgtcagtacggagctg
gagattattaggcaacgtgttaaaagattgatgaaaaagaaaaggctactggaggtgcaa
aagctggttaaaagtgaggatgatattaagtcttggggtcgggatgcccaggctaagctg
ggaagccgtctgatagaattattaacagaaacagcttttgtacaacctccagttagccag
ttacctgacggcccacctgaaattcgtcctgcatttaggcacaggtttaaaactctgatg
aaggagccaggacagagtgttggaaagaggtatggagttatagaatgtgacccactagtc
ctcaaagggcttgacagaaccgctaggcatatggcgattccttacatgccaatgttgata
ccacccaaaaagtggaaagggtacgacaagggtggacacctgttcttaccgtcatatgtg
atgcgtactcatggagcaaagcaacaacaagatgcagttaggaatgtttctagaaagcag
atgcaaaaagtatttgagcatattcaggctctggatacacttggaaacactagatggaga
gtgaataaaagaatacttgacgttgtagagagcctttgggctaaaggtgggaacattgga
ggccttgttgatcgtgaagatattccaataccagaaaagccaaactcggatgatttaagt
gtaatacagaagtggaaatggagcatgagaaaagcaaagaagattaaccgagagttgcat
tcacaacgatgtgatacagagctgaagcttgctgtggctcggaaaatgaaaaatgatgaa
ggcttttattatccccataatctagactttcgaggtcgtgcctatcccatgcattcacat
ttgaatcatctaagttctgacctgtgtcgtggagttcttgagttttcagaaggacggcca
ctagggaaatctgggttgcactggctgaagatacatctgggaaatctgtatggtggcggt
gttgaaaagctttcttatgatggacgcatagcttttgtggagaaccatttggatgatatc
tttgattcagcagataaacctgttgagggtaatcactggtggctaaatgctgaagatcct
ttccaatgcttggcagcctgtgttaatctgtcggaggccttaaaaagctcgtcaccacag
actgtcatctcccacctgcctattcaccaagatggttcatgcaatggtttacagcactat
gcagctctgggaagagatagtttggaagcagctgcggtaaacttagttgctcaggagagg
cctgctgacgtttactcagaaatagcttctagggtttttgacatcatgaaaatggactca
gagagggatcctgcaactaaccgaactgctttattagctaaggtcttaattgatcaggta
gatcggaaattggtgaaacaaacagtgatgacttcagtgtatggtgttacttatgttggg
gcacgtgagcagattaaacgaaggctgcaggagaagggtcatatcactgatgatagattg
ctattcagtgcatcttgctatgctgctaaagtcacactgactgctctaggagagatgttc
caagcagcacgtgccattatgggatggcttgctgactgtgcaaaggttattgcatcagaa
aatcaacctgtgagatggacgactcctctcggcctcccagttgtgcagccttatcataaa
acagaaaggcatcttataagaacttcgcttcaggttctggctttgcagcgggagggtgat
atggtcgacgcaaaaagacaacggactgcatttcctccaaattttgtacactctcttgat
ggttcacacatgatgatgacagctattgcctgcaaagatgctggcttacattttgtagga
gttcatgactccttctggacacatgcatgtgatgtggacaaaatgaatcagatcctcagg
gaaaaatttgttgagctttacagcatgcctgtacttgagaaattgctagaaagcttccag
acatcatatccaacattgtcatttcctccccttccagacacaggcaatttcgatttgaga
gaagttctgaagtctccatattttttcaactga
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