Telopea speciosissima (New South Wales waratah): 122655973
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Entry
122655973 CDS
T07910
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122655973
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122655973
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122655973
03019 Messenger RNA biogenesis [BR:
tss03019
]
122655973
03041 Spliceosome [BR:
tss03041
]
122655973
Enzymes [BR:
tss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122655973
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
122655973
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122655973
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122655973
Spliceosome [BR:
tss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122655973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
122655973
NCBI-ProteinID:
XP_043706313
LinkDB
All DBs
Position
3:21355452..21358504
Genome browser
AA seq
303 aa
AA seq
DB search
MEGTALDELVERLLEGRKTKGKRVQLNESEIRQLCITAKEIFLRQPNLLELEAPMNVCGD
IHGQFPDLLRLFECGGFPPEANYLFLGDYVDRGKQSIETICLLLCYKIKYQDNFFLLRGN
HECASINRIYGFYDECKRRFSVRLWKTFTDCFNCLPVSAIIDDKILCMHGGLSPEMGSLD
QIRAIERPIDVPDQGLLCDLLWADPDREIKGWGENDRGVSYTFGADKVTEFLKKHDLDLV
CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFNNAGALMSVDASLLCSFQILKPWRGKSV
QPE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaagggactgcattggacgaactggttgagaggctattggaagggaggaagaccaaa
ggaaaacgtgttcagctcaacgaatctgagattcgtcagctttgcattaccgccaaggag
atattcctgcgccaacccaatttattggaattagaagctcccatgaatgtttgtggtgac
atacatggacagttcccagacctcctacgcttgtttgaatgtggaggtttccccccagaa
gccaattacctattccttggggactatgtggatagaggaaaacagagcatcgagaccata
tgccttctcctttgttacaagatcaagtaccaagataacttcttcctccttcgaggaaac
catgaatgtgcttccatcaacagaatctatggattctatgatgaatgtaagcgccgattc
agcgttcgtctttggaagaccttcacagactgtttcaactgtttaccagtttcagcaatc
attgatgacaagatcttatgcatgcatggtggtctgtccccagaaatggggagcttggat
cagataagagcaattgagaggccaattgacgtgcctgatcaggggctgttgtgtgatcta
ctttgggcagatcctgacagagaaataaaaggatggggggagaatgataggggagtttcc
tatacttttggtgcagacaaggtgactgagttcttgaagaagcatgaccttgatctagtt
tgtcgggctcatcaggtggttgaagatgggtatgagttctttgcagacaggcaactagtt
acgatattctcagccccaaactattgtggagaattcaacaatgcaggtgcactgatgagt
gtggatgcaagtttgttatgctcttttcagattctcaaaccctggaggggcaaatcagtt
cagccggaatag
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