Telopea speciosissima (New South Wales waratah): 122655976
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Entry
122655976 CDS
T07910
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tss03000
]
122655976
04121 Ubiquitin system [BR:
tss04121
]
122655976
Transcription factors [BR:
tss03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122655976
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
122655976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
122655976
NCBI-ProteinID:
XP_043706316
LinkDB
All DBs
Position
3:17733684..17737245
Genome browser
AA seq
1091 aa
AA seq
DB search
MSYQQRSDRREGPRVPARTARQEWVPRGSIATVVNPPSSFNSNPNGNGGDSNYSSAPPSN
RHRGGFARRRYTAPPAHPKNDPEILEPMVFDVPQLVQEIQDKLAKRAVECMICYDMVGRS
APIWSCSSCYSIFHLNCIKKWARAPTSVDLSVEKNQRGNWRCPGCQSVQLLTAKEIQYLC
FCGKRPDPPTDLYLTPHSCGEPCGKPLDREVAGGGDSNDDDRCPHVCVLQCHPGPCPPCK
AFAPPRRCPCGKKTITTRCSDRKSLFTCGQPCKKILECGRHRCERICHLGPCDPCGAMIK
ASCFCKKKVEILLCGEMVVKGNVRQMDGVFSCNSTCGKELACGNHFCGEDCHPGPCGDCE
LTPWRIKTCYCGKTRIQNERRSCLDTIPTCSQACGKLLPCGIHQCKESCHARDCPTCLVP
ANQKCRCGSSSRTVECYRTVDEMDKFVCDKPCGRKKSCGRHRCSERCCPLSGSSNQVLGH
WDPHLCSMVCGKKLRCGQHSCGSLCHSGHCPPCLETIFTDLACACGKTSIPPPQPCGTPP
PSCQHPCSVPQPCGHPPSHSCHFGDCPPCSIPVAKECIGEHVVLRNIPCGTRDIRCNQLC
GKTRQCGMHACGRTCHPPPCDSNSGSESGSGSGVKVSCGQICSSPRRDCRHTCTATCHPS
SPCPDLRCDFPVTITCSCGRITATVPCDAGGSGHVDTVFEASVIHKLPVPLHPVEATGKK
VPLGQRKLACDEECTKLERRRVLADAFDITPPNLDALHFGENSTVSDVLADLYRRDPKWV
LSIEERFRFLVIGKSRGGTSSSLRVHVFCPMVKEKRDAVRQIAVRWKLAIHAAGWEPKRF
LVVHVTPKSKAPSRILGAKGAVTVAMSQPVFDPLVDMDPRLVVAFLDLPRDADISALVLR
FGGECELVWLNDKNALAVFSDPARAATALRRLDHGSVYHGAAVVLQNGGPTSSGLNAWGT
GAAKEGSVVTTHKGNPWKKSVVQESSWRDDSWGGRESPGASADVLVSAWKGKEAPFAPSR
NRWGILDSDAFSNSAATSSVGTDDTGNHWVASSSTSGLETNTSGSSSTVQPGVLNDAELS
EVVDDWEKAYE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccaacagcgcagtgaccgaagggagggacctcgggttcctgctcgtactgcc
cgtcaagagtgggttcctagaggatccattgccactgttgtgaatccaccttcgagcttc
aattcaaatcccaacggaaatggtggagactcgaattacagttccgcccctccttcgaat
cggcatagaggaggcttcgctcggcgaagatacacggcgccgcctgcgcatccgaagaac
gacccggagattctagagccgatggtattcgatgtcccgcaacttgtgcaagaaattcaa
gataagctagcaaaaagagcggttgaatgcatgatttgttatgatatggtggggaggtct
gccccaatctggtcgtgctcgagctgttactccattttccatctcaattgtataaagaaa
tgggctagggcaccgacttctgttgacttgtctgtggaaaagaatcagagagggaattgg
cgctgccctggttgccagtctgtgcagctgctcacggcgaaggaaattcaatatctttgc
ttctgtgggaagagaccagaccctcctactgatttgtatctgacaccgcattcttgtgga
gagccatgtgggaagccattggatagggaggttgctggcggtggcgatagcaatgacgat
gatcggtgcccccatgtctgtgtcttgcagtgtcacccgggtccatgtcctccttgtaaa
gcatttgctccccctcgcaggtgcccttgtgggaagaagacgattacgacgagatgctct
gatcggaagtccttgtttacttgtgggcagccctgtaagaagattctggaatgtgggcgt
cacaggtgtgagcgaatttgccacctgggaccatgtgacccttgtggggctatgatcaaa
gcgtcgtgtttctgcaagaagaaggtagagatccttctctgtggagagatggttgttaaa
gggaatgtgagacagatggatggtgttttctcgtgtaactccacttgtggcaaggagctt
gcttgtggaaatcatttctgtggcgaggattgccatcctggtccatgtggggattgcgag
ttgacgccttggaggattaagacctgctactgtggcaaaacgaggatacagaatgaaaga
cggagttgcttggatacaattccgacctgctcgcaggcttgtggtaagcttcttccttgt
gggattcaccaatgtaaggagtcgtgccatgctagggactgtcctacttgtttggttccg
gccaaccagaaatgccgttgtggttcttcttctcggactgttgagtgttacagaacagtg
gacgagatggataagtttgtctgtgataaaccttgcgggagaaaaaagagctgtgggagg
cacaggtgcagtgagaggtgttgccctctctctggttccagcaaccaagttttgggccat
tgggaccctcatttgtgttcgatggtatgtgggaagaagctcagatgtgggcagcattct
tgtgggtcactgtgccacagcggccattgcccaccttgccttgaaaccatcttcactgac
ctggcctgtgcttgtgggaaaacttcaataccccctcctcagccttgtggtacccctcct
ccttcttgtcaacacccatgttcagttccccagccctgtggccatccaccatctcacagt
tgccattttggtgattgcccaccttgttcaattccggtggcgaaggaatgcattggtgag
catgtcgttctcaggaacataccttgtggtacgagggacattcgatgtaatcagctctgt
ggcaagacacgacagtgtggtatgcatgcttgtggaaggacttgtcatcctccaccttgt
gattctaacagtgggtctgagtctgggtctggttctggtgtgaaggtttcttgtgggcaa
atatgtagttctcctaggagagattgtaggcacacatgtactgctacttgtcatccatca
tcaccttgtcctgatctgagatgtgatttccctgtgacaatcacatgttcctgcggtcgg
attactgccacagtcccttgtgatgccggaggcagtggtcatgtcgatactgttttcgaa
gcatctgttattcacaaattgccggttccacttcatcctgtagaagcaaccggcaagaag
gtcccgcttggacagagaaagctcgcctgtgatgaggagtgcacgaaattggagcgcaga
cgagttcttgcggatgcttttgatattactccgccaaacttggatgcccttcattttggt
gagaattctacagtttctgatgtgcttgctgatctatataggcgagatccaaaatgggtc
ttatctattgaggagagattcaggtttctggtgattggaaagagtagaggaggcacctcg
agtagtctcagggttcatgttttctgtccaatggttaaggagaagagagatgctgtgagg
caaattgcagtgagatggaagcttgcaattcatgcagctgggtgggagccaaagcggttc
cttgtggttcatgtcacccccaagtctaaagctccatctcgaattcttggtgccaagggt
gctgtgactgttgctatgtctcagccagtttttgatccattggtcgacatggatccacga
ctagttgtggcttttttggatttgccaagggatgcagatataagcgctttagtcctgagg
tttggtggagagtgtgaactggtctggttgaatgacaagaatgctttagcagtatttagt
gatcctgcccgagcagcaactgctctgaggcggttagatcatggttcggtgtatcatggt
gctgctgtagttcttcagaatggtggtcctacatcttctggtctcaatgcatggggaact
ggggctgcaaaggaggggagtgtagttacaacccataagggtaatccatggaaaaagtct
gttgtacaggaatccagttggagggatgactcttggggtggcagagagtcgcctggtgcc
tcagctgatgtgcttgtgtctgcatggaaagggaaggaagctccatttgctccttcaagg
aacagatggggcattcttgactcagatgcattttctaattctgctgctacctcttctgtt
ggaactgatgatacaggtaaccattgggtggcaagttcttccacttcaggactggaaaca
aacacgtcaggttcaagttccacagtgcagcctggagtgcttaatgatgctgagttgtct
gaagtagtggatgattgggagaaagcttatgagtaa
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