Telopea speciosissima (New South Wales waratah): 122656095
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Entry
122656095 CDS
T07910
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03082
ATP-dependent chromatin remodeling
tss03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122656095
03083 Polycomb repressive complex
122656095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122656095
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122656095
Histone modification proteins
HAT complexes
HATB complex
122656095
HDAC complexes
Sin3A-HDAC complex
122656095
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122656095
PRC2.2
122656095
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122656095
Heterochromatin formation proteins
Other heterochromatin formation proteins
122656095
Chromatin remodeling factors
NuRD complex
122656095
NuRF complex
122656095
NuRF complex (fruit fly)
122656095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IP5PC_F
DUF3798
Motif
Other DBs
NCBI-GeneID:
122656095
NCBI-ProteinID:
XP_043706470
LinkDB
All DBs
Position
3:complement(26846703..26874651)
Genome browser
AA seq
470 aa
AA seq
DB search
MRERGKAGQPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVLANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTE
PFVLSGGKDKSVVLWSIQDHISASATEPGSAKSPGSGSSSIKHTSKGGDKASDSPSVGPR
GIYQGHEDTVEDVQFCPSSVQEFCSVGDDSCLILWDARAGTSPAIKVEKAHNADLHCVDW
NPHDENLILTGSADTSVRMFDRRNLTSGGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSS
AEDGFLNVWDHEKVGKKKDRVGTRMPNSPPGLFFQHAGHRDKVVDFHWNASDPWTIVSVS
DDCESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILSCSSKSGDCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagagggaaagctgggcagccatcggtggacgagagatacacacaatggaag
tctttggttcccgtcctctacgactggcttgccaaccacaaccttgtctggccttctctc
tcttgccggtggggaccacaacttgagcaagctacatacaagaaccgtcagcgtctctac
ctttctgagcagactgacggcagtgttccaaacacactagtgttagcaaattgtgaagtt
gtgaaaccaagggttgctgcagcagagcacatatcacagtttaatgaagaagcacgctct
ccctttgtaaagaagttcaaaactattattcatcctggagaagtgaacagaattagagaa
ctgccgcaaaacagtaagatagtggcaacccatactgatagtccggatgttctcatttgg
gacgttgaggctcaacctaatcgtcatgcggtcctgggagctgcagactctcgaccagac
ctgatattgactggacaccaagataatgcggagtttgcacttgcaatgtgtccaactgaa
ccttttgtgctatctggaggaaaagacaagtcagtggtcttgtggagtattcaagatcat
atctctgcttcagccacagaaccaggatctgcaaaatctccagggtctggaagctcaagc
attaaacatacctcaaagggtggtgataaagcttcagacagtccgtctgttggaccacgt
ggtatctatcaagggcatgaggatactgttgaagatgtgcaattctgtccttcaagtgtg
caggagttctgcagtgtgggtgatgattcttgccttatactatgggatgcacgagctggc
actagtccagccatcaaggttgagaaagctcataatgctgatcttcactgcgttgattgg
aatccacatgatgaaaaccttattttgacagggtcagctgatacgtctgttcgtatgttt
gaccgtcgaaacctcacttctggtggtgttggttcacccatctataaatttgagggtcac
aaagcggctgttctttgtgtgcagtggtcgccagacaagtcatctgtttttggcagttct
gctgaagatggtttcttaaatgtttgggatcatgagaaggttggtaaaaaaaaagatcgt
gttggtacaagaatgccaaattctcctccaggcttatttttccaacatgctgggcacagg
gataaagttgttgatttccactggaatgcatctgatccatggacaattgttagtgtgtct
gatgattgtgagagtactggtggaggtgggacattgcagatatggcgcatgagtgacttg
atttatagaccagaagaggaggttcttgctgagctggagaagttcaaatcgcacatactc
tcgtgttcatcaaaatctggagattgtaaatga
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