Telopea speciosissima (New South Wales waratah): 122656145
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Entry
122656145 CDS
T07910
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122656145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122656145
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122656145
mRNA degradation factors
5'-3' decay
Lsm complex
122656145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
122656145
NCBI-ProteinID:
XP_043706534
LinkDB
All DBs
Position
3:complement(27619257..27629178)
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIFLSTSLASYLDKKLLILLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVPAAEIKRAQKAERDSTDLKGSMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggcccggaagatatctttctttccacgtctcttgcgagctaccttgac
aagaaacttctcattttgctgcgagatggtcgaaaactcttggggatacttcgctctttc
gatcaatttgccaatgctgttcttgaaggtgcttgcgagcgggtgattgttggtgatctt
tattgtgacattcccttaggtctctatgtaattcgtggagagaatgttgtcttaattggt
gagctggacctcgagagggaggagcttcccccgcatatgactcgtgttccagctgcagaa
ataaaaagggcacagaaagcggaaagggattctacagatctgaaaggctccatgagaaag
aggatggagttccttgatctggattga
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