Telopea speciosissima (New South Wales waratah): 122656232
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Entry
122656232 CDS
T07910
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Module
tss_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122656232
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122656232
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122656232
NCBI-ProteinID:
XP_043706645
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Position
3:complement(6757720..6760492)
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AA seq
472 aa
AA seq
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MKKDTNFFLLFILLLLIVILIDSSASLVEARKDNKKHQKQKKRSGNNQTAAGPVHSPVPS
HAPSPCYGPYPTHSTIFDILSFGAKGDGVSDDSKAFEAAWKAACRVTGATVEIPSEFRFL
VRPLTLQGPCKPHLVLQIDGTLLAPPKVGAWPKSSLFQWINFKWIHNFTIQGTGTVDGQG
SAWWNPSGINYVQKLSKHIPDLKPTALRFYGSYNVIVRDITIINSPGCHLKFDGTGGVKV
DNITISSPGDSPNTDGIHLQNVHDVEIKHSNIGCGDDCVSIQTGSTNVHVHHVNCGPGHG
ISLGGLGKDKTVACVSGITIENINVQNALSGVRIKTWQGGMGSVKNVSFSNIQVVDVEIP
IMIDQYYCDKMKSCKNQTEAVAITGVKYNQITGTYSVQPIHLACSNNVPCIDVDLIDIQL
QPSPGSTGFQQGLCWNSYGKSQAPLVPSTIDYCLRRGGSWAKQPARSNDHSC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagacacaaatttctttcttctcttcattctgcttctcttgattgtgatactc
attgactcctctgcaagtttagtggaggcaaggaaggataataagaagcatcagaaacag
aagaaacggtctggcaacaatcaaactgctgctggaccagtgcattctcctgtaccttct
catgctccatctccttgctatggtccatatcctacccactcaaccatttttgatatcttg
tcttttggagccaagggtgatggagtttcagatgactcaaaggcctttgaagcagcatgg
aaagctgcctgcagggttactggagccacagtggaaatcccatcagaattcaggtttcta
gtcagaccattaactctccaaggcccatgtaagcctcatcttgttcttcagatagatggg
actctcttagctcctccaaaggtaggtgcctggccgaaatccagcttgtttcaatggata
aacttcaagtggattcataacttcaccatccaaggaactggtactgttgatggccaaggt
tctgcttggtggaatccctcaggaatcaactatgttcagaagctatccaaacatatacca
gatctgaaaccaactgctttgaggttctatggaagctacaatgtgattgttagggacata
accatcataaacagtcctgggtgccatctaaaatttgatggcactggaggagttaaggtt
gacaatattacaatctcttcacctggtgacagtcccaacactgacggcattcaccttcaa
aacgtccatgatgtggaaataaagcattccaacattggatgtggagatgattgtgtatcc
atacaaactgggagcactaatgttcatgttcatcatgtgaactgcggccctggtcatggt
attagtttaggagggctagggaaagacaaaactgtggcatgtgtatctggcattaccatt
gaaaacatcaatgttcaaaatgctctatctggagtgaggatcaaaacatggcagggaggt
atgggatctgtgaagaatgtttcattttccaacattcaagttgtcgatgtggagattccg
atcatgatcgaccagtactactgtgacaagatgaaatcttgcaagaaccagacagaagca
gtggcaataacaggagtcaagtataatcagattactgggacttactcagtgcaacccatt
catctggcatgtagtaacaatgttccttgcattgatgtcgatctaatcgacatccagtta
cagccatcaccgggttctactgggtttcaacagggtttgtgttggaactcttatgggaag
tcacaggccccccttgttccttcaaccattgattattgcttgcgtaggggtggtagttgg
gctaagcaaccagcaagatcaaatgaccactcttgttag
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